iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099681

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000342

Gene Name

POPTRDRAFT_763124; POPTR_0006s23270g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s23270	POPTR_0006s23270.1	POPTR_0006s23270.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.90e-06	27.8	203	244

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC+e +   +d ++ lpC H+fh  C+  w       +k+ +CP Cr
   Q: 203  CVICREKMsggRD-VCELPCEHLFHWMCILPW------LKKTNTCPCCR 244
           ********89555.******************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MEEETIITAA LSTLASPQLT DLTSSILSLT LHHHSRLSSL LCSPSLFSLA LHHLHSLSLA 60
HKTLLIAKYL LSSLHHLTRH FHPPTLIPPH PTTTIKHRDL DAALLLIFLC DVHQESPEIL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACTAGTAAT ACGGGGGAGA TAATTGACTT TAGCAAAACA ACAAATGATG CCCGACTAGT 60
CGGTCAGTTA AGCTCGCATA AAAAGCCACA CATTCTTCAA CCTTTCCACA CTCTCCAGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0006s23270g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002887	Amborella trichopoda	32.37	2.00e-24	105.00
IUUC-Aly-005538	Arabidopsis lyrata	50.00	1.00e-47	182.00
IUUC-Ath-006921	Arabidopsis thaliana	49.19	1.00e-46	179.00
IUUC-Bdi-014905	Brachypodium distachyon	35.33	9.00e-20	89.40
IUUC-Bol-016141	Brassica oleracea	53.76	4.00e-44	171.00
IUUC-Bra-017782	Brassica rapa	53.76	5.00e-45	173.00
IUUC-Gma-043966	Glycine max	59.11	4.00e-47	180.00
IUUC-Lpe-051463	Leersia perrieri	38.78	6.00e-23	100.00
IUUC-Mac-065543	Musa acuminata	40.88	5.00e-33	134.00
IUUC-Oba-075686	Oryza barthii	38.13	5.00e-18	84.00
IUUC-Ogu-078394	Oryza glumaepatula	38.13	5.00e-18	84.00
IUUC-Oin-079750	Oryza indica	36.00	1.00e-18	86.30
IUUC-Oni-082513	Oryza nivara	36.00	6.00e-19	87.40
IUUC-Oru-084366	Oryza rufipogon	38.13	5.00e-18	83.60
IUUC-Osa-085930	Oryza sativa	36.00	6.00e-19	87.40
IUUC-Ppe-101554	Prunus persica	62.39	9.00e-56	211.00
IUUC-Sly-111721	Solanum lycopersicum	49.09	2.00e-51	194.00
IUUC-Stu-112332	Solanum tuberosum	44.25	8.00e-49	186.00
IUUC-Sbi-114490	Sorghum bicolor	52.17	2.00e-15	75.50
IUUC-Tca-121044	Theobroma cacao	63.13	1.00e-63	235.00
IUUC-Vvi-131513	Vitis vinifera	56.12	6.00e-52	196.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence