iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oin-079863

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BGIOSGA004278	BGIOSGA004278-TA	BGIOSGA004278-PA

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-06	29.5	395	430

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf......sd.tl..lvsGsdDgtikvW 28
           H ++vt++++      s+ +l  l++G+ Dg+ k+W
   Q: 395  HLSWVTAISWelfssgSSkPLllLATGCSDGSSKIW 430
           99***********98844444448************ PP

Organism

Oryza indica

Protein Sequence
(Fasta)

MASHYQAATL IASPSYPNAI AWSTENLVAV ASGHLITILN PSALEGPREL VVLRPSDPFP 60
IGVVNREDLF EPCIMATSLA RETELCARSI SWSQQGFSPN SGCLLAVCTV DGHVKLYRSP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTTCGC ATTACCAGGC TGCCACCTTG ATCGCGTCGC CGTCGTACCC AAATGCAATC 60
GCTTGGTCGA CTGAGAACCT GGTGGCTGTT GCCTCTGGTC ACCTTATCAC TATCCTGGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003046	Amborella trichopoda	38.04	2.00e-84	306.00
IUUC-Aly-005715	Arabidopsis lyrata	35.99	3.00e-90	326.00
IUUC-Ath-007637	Arabidopsis thaliana	36.70	1.00e-108	387.00
IUUC-Bdi-014902	Brachypodium distachyon	60.00	0.00e+00	1016.00
IUUC-Bol-016169	Brassica oleracea	35.84	3.00e-94	338.00
IUUC-Bra-017736	Brassica rapa	37.29	1.00e-107	384.00
IUUC-Gma-044065	Glycine max	39.95	4.00e-82	298.00
IUUC-Hvu-047339	Hordeum vulgare	60.49	1.00e-17	80.10
IUUC-Mtr-058653	Medicago truncatula	33.68	9.00e-96	344.00
IUUC-Mac-065235	Musa acuminata	46.19	0.00e+00	756.00
IUUC-Ogl-077286	Oryza glaberrima	91.23	0.00e+00	1669.00
IUUC-Oru-084242	Oryza rufipogon	97.45	0.00e+00	1776.00
IUUC-Osa-085660	Oryza sativa	99.33	0.00e+00	1823.00
IUUC-Ppa-095823	Physcomitrella patens	31.95	2.00e-75	276.00
IUUC-Pop-098900	Populus trichocarpa	40.06	1.00e-137	483.00
IUUC-Ppe-101763	Prunus persica	39.42	1.00e-113	403.00
IUUC-Smo-108757	Selaginella moellendorffii	29.15	7.00e-97	347.00
IUUC-Sit-110507	Setaria italica	60.94	0.00e+00	1049.00
IUUC-Sly-111401	Solanum lycopersicum	43.75	5.00e-78	284.00
IUUC-Stu-112879	Solanum tuberosum	44.02	6.00e-56	211.00
IUUC-Tca-121440	Theobroma cacao	36.64	1.00e-152	533.00
IUUC-Tae-124422	Triticum aestivum	60.40	0.00e+00	1032.00
IUUC-Vvi-131537	Vitis vinifera	37.72	7.00e-113	400.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence