iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114330

Ensembl Protein ID

Sb06g023320.1

UniProt Accession

C5YCJ9; C5YCJ9_SORBI

Genbank Protein ID

EES11157.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000765

Gene Name

SORBI_006G156300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb06g023320	Sb06g023320.1	Sb06g023320.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.50e-28	96.4	475	505

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWD 29
           H+d vtc++f   +d++++sGs D ++++W+
   Q: 475  HSDYVTCIQFnpvDDRYFISGSLDEKVRIWS 505
           9***********766***************9 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSAGGGEEEE EEEEEEEVFY ESRDRVLSSS CSSTSASDDD DNDRPRRRRD GAASAAAAAA 60
AAAAALDVWT SEPAPVQERR RKLLQMMGLA GDPALARLEM GRSVSYDGPV RPAPVSPISR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCGCCG GCGGCGGGGA GGAGGAAGAG GAGGAGGAGG AGGAGGAGGA GGTGTTCTAC 60
GAGTCGCGGG ACCGCGTGCT CTCCTCCTCC TGCTCCTCCA CCTCCGCCTC AGACGATGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

sbi:SORBI_06g023320

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005741	Arabidopsis lyrata	54.49	1.00e-175	608.00
IUUC-Ath-007063	Arabidopsis thaliana	54.89	2.00e-175	608.00
IUUC-Ago-007814	Ashbya gossypii	34.15	1.00e-43	171.00
IUUC-Bol-016459	Brassica oleracea	53.98	5.00e-175	607.00
IUUC-Bra-017269	Brassica rapa	53.70	4.00e-173	600.00
IUUC-Csv-025844	Ciona savignyi	30.33	9.00e-58	216.00
IUUC-Fso-038143	Fusarium solani	33.65	3.00e-58	219.00
IUUC-Gma-043178	Glycine max	56.93	0.00e+00	644.00
IUUC-Lpe-050824	Leersia perrieri	78.63	0.00e+00	1073.00
IUUC-Mtr-058330	Medicago truncatula	52.33	0.00e+00	627.00
IUUC-Mdo-062300	Monodelphis domestica	31.25	7.00e-62	231.00
IUUC-Mac-064884	Musa acuminata	57.95	0.00e+00	709.00
IUUC-Ont-072128	Oreochromis niloticus	29.78	4.00e-59	222.00
IUUC-Oba-075718	Oryza barthii	74.20	0.00e+00	986.00
IUUC-Obr-076635	Oryza brachyantha	81.74	0.00e+00	1071.00
IUUC-Ogl-077783	Oryza glaberrima	83.91	0.00e+00	871.00
IUUC-Ogu-078005	Oryza glumaepatula	78.01	0.00e+00	1077.00
IUUC-Oin-079138	Oryza indica	77.88	0.00e+00	1083.00
IUUC-Oni-082452	Oryza nivara	80.82	0.00e+00	1134.00
IUUC-Opu-084083	Oryza punctata	76.45	0.00e+00	1087.00
IUUC-Oru-085211	Oryza rufipogon	79.48	0.00e+00	1072.00
IUUC-Psi-094089	Pelodiscus sinensis	31.23	8.00e-62	231.00
IUUC-Ppa-095184	Physcomitrella patens	40.45	6.00e-97	348.00
IUUC-Pfo-097366	Poecilia formosa	30.15	6.00e-59	221.00
IUUC-Pop-099492	Populus trichocarpa	61.26	1.00e-138	486.00
IUUC-Ppe-101184	Prunus persica	58.70	2.00e-174	605.00
IUUC-Pte-104369	Pyrenophora teres	30.64	3.00e-59	222.00
IUUC-Pyt-104811	Pyrenophora triticirepentis	29.68	3.00e-57	215.00
IUUC-Sce-106277	Saccharomyces cerevisiae	31.59	1.00e-44	174.00
IUUC-Sja-107954	Schizosaccharomyces japonicus	36.91	2.00e-59	223.00
IUUC-Sit-110585	Setaria italica	85.73	0.00e+00	1207.00
IUUC-Sly-111804	Solanum lycopersicum	51.10	5.00e-177	613.00
IUUC-Stu-111949	Solanum tuberosum	57.85	4.00e-177	614.00
IUUC-Tca-121052	Theobroma cacao	57.53	6.00e-176	610.00
IUUC-Tae-125477	Triticum aestivum	73.85	0.00e+00	972.00
IUUC-Vvi-130908	Vitis vinifera	55.82	6.00e-170	590.00
IUUC-Xma-134131	Xiphophorus maculatus	30.15	5.00e-59	222.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence