iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131623

UUCD1 version

UUC-ViV-00979

Ensembl Protein ID

VIT_18s0122g01040.t01

UniProt Accession

F6I6U1; F6I6U1_VITVI

Genbank Protein ID

CCB62659.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

FN596759

Gene Name

VIT_18s0122g01040

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_18s0122g01040	VIT_18s0122g01040.t01	VIT_18s0122g01040.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.10e-24	86.8	29	105

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqawceens 73
           +++ f+Cp+++++MrdP +l++G+t++r++Iekw++++++      cP+t ++l+++dl P+++lr++i++w ++n+
   Q: 29   IYDSFVCPLTKQVMRDPITLENGQTFEREAIEKWFKECKEsgrklVCPLTLKELRSTDLNPSIALRHTIEEWTARNE 105
           799********************************777777778*****************************9986 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MAGSWDGSYD PGSQSDESHH FERSHLEPIY DSFVCPLTKQ VMRDPITLEN GQTFEREAIE 60
KWFKECKESG RKLVCPLTLK ELRSTDLNPS IALRHTIEEW TARNEAVQLD MARRSLSLGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTGGAA GCTGGGATGG GAGTTATGAC CCTGGTAGCC AGTCAGATGA GAGCCATCAT 60
TTTGAGAGGT CACATTTAGA GCCTATCTAT GATTCTTTCG TTTGCCCTCT AACAAAGCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

vvi:100252979

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000143	Aegilops tauschii	66.91	0.00e+00	1092.00
IUUC-Atr-002916	Amborella trichopoda	69.04	0.00e+00	1120.00
IUUC-Aly-005480	Arabidopsis lyrata	65.40	0.00e+00	1021.00
IUUC-Ath-007569	Arabidopsis thaliana	65.89	0.00e+00	1028.00
IUUC-Bdi-014487	Brachypodium distachyon	65.07	0.00e+00	1062.00
IUUC-Bol-016384	Brassica oleracea	64.40	0.00e+00	940.00
IUUC-Bra-017058	Brassica rapa	64.91	0.00e+00	974.00
IUUC-Gma-044318	Glycine max	81.80	0.00e+00	1368.00
IUUC-Hvu-047783	Hordeum vulgare	67.04	0.00e+00	1102.00
IUUC-Lpe-050971	Leersia perrieri	66.42	0.00e+00	1035.00
IUUC-Mtr-058511	Medicago truncatula	80.44	0.00e+00	1325.00
IUUC-Mac-064911	Musa acuminata	66.58	0.00e+00	1043.00
IUUC-Oba-075225	Oryza barthii	66.42	0.00e+00	1073.00
IUUC-Obr-076103	Oryza brachyantha	66.17	0.00e+00	1035.00
IUUC-Ogl-077529	Oryza glaberrima	66.42	0.00e+00	1072.00
IUUC-Ogu-078735	Oryza glumaepatula	66.17	0.00e+00	1069.00
IUUC-Oin-079422	Oryza indica	66.17	0.00e+00	1052.00
IUUC-Olo-080644	Oryza longistaminata	57.48	0.00e+00	870.00
IUUC-Ome-081455	Oryza meridionalis	66.05	0.00e+00	1066.00
IUUC-Oni-082690	Oryza nivara	66.05	0.00e+00	1050.00
IUUC-Opu-083157	Oryza punctata	66.42	0.00e+00	1071.00
IUUC-Oru-085058	Oryza rufipogon	66.17	0.00e+00	1052.00
IUUC-Osa-086000	Oryza sativa	66.17	0.00e+00	1052.00
IUUC-Ppa-096021	Physcomitrella patens	50.74	0.00e+00	794.00
IUUC-Pop-099966	Populus trichocarpa	84.99	0.00e+00	1390.00
IUUC-Ppe-101973	Prunus persica	81.30	0.00e+00	1335.00
IUUC-Smo-109219	Selaginella moellendorffii	50.06	0.00e+00	744.00
IUUC-Sit-110490	Setaria italica	66.79	0.00e+00	1067.00
IUUC-Sly-111702	Solanum lycopersicum	79.53	0.00e+00	1211.00
IUUC-Stu-111962	Solanum tuberosum	79.46	0.00e+00	1315.00
IUUC-Sbi-113974	Sorghum bicolor	53.36	0.00e+00	826.00
IUUC-Ssc-115521	Sus scrofa	27.73	2.00e-08	53.10
IUUC-Tca-121113	Theobroma cacao	84.50	0.00e+00	1413.00
IUUC-Tae-125341	Triticum aestivum	54.52	0.00e+00	801.00
IUUC-Tur-126573	Triticum urartu	66.79	0.00e+00	1092.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence