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Tag Content
UUCD2 ID IUUC-Ssc-115686
UUCD1 version UUC-SuS-00891
Ensembl Protein ID ENSSSCP00000000729.2
UniProt Accession F1SLU6; F1SLU6_PIG
Genbank Protein ID ENSSSCP00000000729
Protein Name Ubiquitinyl hydrolase 1
Genbank Nucleotide ID FP325257
Gene Name USP5
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSSSCG00000000684.2 ENSSSCT00000000745.2 ENSSSCP00000000729.2
Status Unreviewed
Classification
Family E-Value Score Start End
DUB/USP 1.10e-63 215.7 326 856
UBD/Alpha-Helix/UBA 5.10e-23 80.8 726 763
Active Site
Position(s) Description Evidence
335 Nucleophile {ECO:0000256|PIRSR:PIRSR016308-1}
819 Proton acceptor {ECO:0000256|PIRSR:PIRSR016308-1}
Domain Profile

   DUB/USP
   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeel....................wkskkkavs 69
           tG++NlgN+CY+NSv+Q+L++ip++++ + + k ek+ +++p++p+++++++++kl + l                    +k+ +  ++
   Q: 326  TGIRNLGNSCYLNSVVQVLFSIPDFQRKYVD-KLEKIFQNAPTDPTQDFSTQVAKLGHGLlsgeyskpapesgdgeqvpeQKEVQDGIA 413
           7******************************.99999999********************66666666666666655443366666*** PP
   S: 70   prellkalkkeaeefsgyeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikcle 158
           pr++++ ++k ++efs+++qqDaqEf+ +l++ +e+++                             ++++  +++F++ ++++ikcl+
   Q: 414  PRMFKALISKGHPEFSTNRQQDAQEFFLHLINMVERNC-----------------------------RSSENPNEVFRFLVEEKIKCLA 473
           **************************************.............................6788899*************** PP
   S: 159  cdnvssreepfldlslpvpgkeetkke............................slqdcLesftkeeelegenkyycekckkkqeaek 219
            ++v+ ++   + ++lpvp++   +k                              +++cLe++ ++e++++   ++++  ++k+ a+k
   Q: 474  TEKVKYTQRVDYIMQLPVPMDAALNKAeelleyeekkrqaeeeklplpelvraqvPFSSCLEAYGAPEQVDD---FWSTALQAKSVAVK 559
           ********************998887799*****************************************97...************** PP
   S: 220  klklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfcts......................................... 267
           ++++ ++P++L++++k+f+f  + ++++k++ ++e+p+eLd+s+   +                                         
   Q: 560  TTRFASFPDYLVIQIKKFTFGLD-WVPKKLDVSIEMPEELDISQLRGTglqpgeeelpdiapplvtpdepkgslgfygnededsfcsph 647
           ********************997.*******************9888878888888888888888888888888888888777777777 PP
   S: 268  .............................................................................peekqke..... 274
                                                                                        p     e     
   Q: 648  fssptspmldesviiqlvemgfpmdacrkavyytgnsgaeaamnwvmshmddpdfanplilpgssgpgstsaaadppP-----Edcvtt 731
           777777777777777777777777777777777766666666666666666666666666666666555555555550.....055555 PP
   S: 275  ...................................................................kkkYeLiavvvHsG.slssGHY 295
                                                                              + kY+L+a ++H+G s+ +GHY
   Q: 732  ivsmgfsrdqalkalratnnsleravdwifshiddldaeaamdisegrsaadsisesipvgpkvrdgPGKYQLFAFISHMGtSTMCGHY 820
           5555555555555566666666667777777777777777777777777778888888888888888********************** PP
   S: 296  vayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           v+++k+ +g+W+ ++D+kV ++  e+  +   + +Y++fY+r
   Q: 821  VCHIKK-EGRWVIYNDQKVCAS--EKPPK---DLGYIYFYQR 856
           ******.9***********999..78888...89******98 PP
   

   UBD/Alpha-Helix/UBA
   S: 4    edkleqlveMGFdreealqaLraannnleaAveyLldg 41
           ed +  +v+MGF+r++al+aLra+nn+le+Av++++++
   Q: 726  EDCVTTIVSMGFSRDQALKALRATNNSLERAVDWIFSH 763
           889999******************************97 PP
   
Organism Sus scrofa
Protein Sequence
(Fasta)
MAELSEEALL SVLPTIRVPK AGDRVHKDEC AFSFDTPESE GGLYICMNTF LGFSKQYVER 60
HFNKTGQRVY LHLRRTRRPK EEDTTAGTGD PPRKKPTRLA IGIEGGFDLS EKKFDYDEDV 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ssc-115686|DUB,USP;UBD,UBA|Sus scrofa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AGCGCATGCA CCTAACGAGT AGTGCTCATT GGACGGAGGG GTAGGGGGTG GGGGACTAGA 60
AGTGGGAGCC GCGGTGTGTG GAGGAGCTGC TGCCGGTGTC ATGGCGGAGC TGAGTGAGGA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ssc-115686|DUB,USP;UBD,UBA|Sus scrofa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1015--Disulfide bond
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR001394--Peptidase_C19_UCH
IPR015940--UBA
IPR009060--UBA-like
IPR016652--Ubiquitinyl_hydrolase
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP
PROSITE

PS50030--UBA
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3
PS50271--ZF_UBP
Pfam

PF00627--UBA
PF00443--UCH
PF02148--zf-UBP
SMART

SM00165--UBA
SM00290--ZnF_UBP
Gene Ontology

GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0008270--F:zinc ion binding
GO:0032436--P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0071108--P:protein K48-linked deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000394 Aegilops tauschii 43.83 0.00e+00 652.00
IUUC-Aml-002104 Ailuropoda melanoleuca 97.41 0.00e+00 1642.00
IUUC-Atr-002580 Amborella trichopoda 45.65 0.00e+00 740.00
IUUC-Apl-003774 Anas platyrhynchos 89.36 0.00e+00 1526.00
IUUC-Aca-005368 Anolis carolinensis 84.52 0.00e+00 1508.00
IUUC-Aly-005727 Arabidopsis lyrata 46.93 0.00e+00 733.00
IUUC-Ath-006974 Arabidopsis thaliana 47.03 0.00e+00 734.00
IUUC-Ago-007890 Ashbya gossypii 29.00 3.00e-82 299.00
IUUC-Acl-008057 Aspergillus clavatus 33.68 9.00e-124 437.00
IUUC-Afl-008547 Aspergillus flavus 36.26 2.00e-117 416.00
IUUC-Afu-008805 Aspergillus fumigatus 34.23 1.00e-114 407.00
IUUC-Ani-009441 Aspergillus nidulans 32.44 3.00e-98 352.00
IUUC-Ang-009720 Aspergillus niger 34.18 3.00e-119 422.00
IUUC-Aor-010111 Aspergillus oryzae 34.06 1.00e-126 447.00
IUUC-Ate-010531 Aspergillus terreus 31.72 5.00e-104 372.00
IUUC-Ame-011893 Astyanax mexicanus 64.13 0.00e+00 992.00
IUUC-Bgr-012183 Blumeria graminis 33.22 4.00e-121 428.00
IUUC-Bta-013179 Bos taurus 98.00 0.00e+00 1650.00
IUUC-Bci-013858 Botrytis cinerea 34.69 1.00e-130 460.00
IUUC-Bdi-014904 Brachypodium distachyon 46.62 0.00e+00 713.00
IUUC-Bol-015296 Brassica oleracea 47.32 0.00e+00 746.00
IUUC-Bra-017939 Brassica rapa 47.32 0.00e+00 748.00
IUUC-Cel-018625 Caenorhabditis elegans 35.01 3.00e-137 481.00
IUUC-Cja-019063 Callithrix jacchus 96.82 0.00e+00 1623.00
IUUC-Cfa-020976 Canis familiaris 95.28 0.00e+00 1594.00
IUUC-Cpo-022265 Cavia porcellus 95.05 0.00e+00 1587.00
IUUC-Cre-022640 Chlamydomonas reinhardtii 39.36 3.00e-113 402.00
IUUC-Csa-024177 Chlorocebus sabaeus 94.04 0.00e+00 1447.00
IUUC-Cho-024702 Choloepus hoffmanni 88.97 0.00e+00 993.00
IUUC-Cin-025411 Ciona intestinalis 50.00 0.00e+00 842.00
IUUC-Csv-026347 Ciona savignyi 46.52 0.00e+00 800.00
IUUC-Cgl-026667 Colletotrichum gloeosporioides 34.29 3.00e-114 405.00
IUUC-Cne-026831 Cryptococcus neoformans 35.52 2.00e-129 456.00
IUUC-Cme-027335 Cyanidioschyzon merolae 31.65 1.00e-47 185.00
IUUC-Dre-027982 Danio rerio 66.94 0.00e+00 1098.00
IUUC-Dno-029034 Dasypus novemcinctus 97.41 0.00e+00 1660.00
IUUC-Dor-030479 Dipodomys ordii 92.91 0.00e+00 711.00
IUUC-Dse-031467 Dothistroma septosporum 36.42 1.00e-131 464.00
IUUC-Dme-032075 Drosophila melanogaster 48.79 0.00e+00 795.00
IUUC-Ete-032865 Echinops telfairi 86.26 0.00e+00 1461.00
IUUC-Eca-034059 Equus caballus 97.67 0.00e+00 1658.00
IUUC-Eeu-035304 Erinaceus europaeus 91.75 0.00e+00 1496.00
IUUC-Fca-035515 Felis catus 97.88 0.00e+00 1652.00
IUUC-Fal-037271 Ficedula albicollis 85.98 0.00e+00 1427.00
IUUC-Fox-037745 Fusarium oxysporum 35.08 3.00e-128 452.00
IUUC-Fso-038158 Fusarium solani 35.65 2.00e-128 453.00
IUUC-Gmo-039071 Gadus morhua 64.88 0.00e+00 1082.00
IUUC-Ggr-040098 Gaeumannomyces graminis 34.56 1.00e-119 424.00
IUUC-Gga-040635 Gallus gallus 89.17 0.00e+00 1596.00
IUUC-Gac-042528 Gasterosteus aculeatus 64.11 0.00e+00 1093.00
IUUC-Gma-043614 Glycine max 45.80 0.00e+00 706.00
IUUC-Ggo-044602 Gorilla gorilla 97.29 0.00e+00 1640.00
IUUC-Hsa-045959 Homo sapiens 97.29 0.00e+00 1640.00
IUUC-Hvu-047563 Hordeum vulgare 47.23 1.00e-171 595.00
IUUC-Itr-048712 Ictidomys tridecemlineatus 98.47 0.00e+00 1654.00
IUUC-Kpa-049156 Komagataella pastoris 33.72 4.00e-116 412.00
IUUC-Lch-049648 Latimeria chalumnae 81.44 0.00e+00 1371.00
IUUC-Lpe-051523 Leersia perrieri 46.08 0.00e+00 717.00
IUUC-Loc-052520 Lepisosteus oculatus 61.74 0.00e+00 1013.00
IUUC-Lma-053216 Leptosphaeria maculans 34.64 3.00e-114 407.00
IUUC-Laf-054327 Loxodonta africana 96.93 0.00e+00 1635.00
IUUC-Mcc-055443 Macaca mulatta 97.17 0.00e+00 1638.00
IUUC-Meu-056298 Macropus eugenii 91.33 0.00e+00 1064.00
IUUC-Mor-057106 Magnaporthe oryzae 35.13 2.00e-131 462.00
IUUC-Mpo-057589 Magnaporthe poae 34.86 3.00e-124 439.00
IUUC-Mtr-058680 Medicago truncatula 48.20 0.00e+00 742.00
IUUC-Mla-058903 Melampsora laricipopulina 32.31 1.00e-120 427.00
IUUC-Mga-059669 Meleagris gallopavo 88.26 0.00e+00 1513.00
IUUC-Mvi-060476 Microbotryum violaceum 34.35 3.00e-120 426.00
IUUC-Mmr-060575 Microcebus murinus 97.41 0.00e+00 1646.00
IUUC-Mdo-062183 Monodelphis domestica 90.45 0.00e+00 1538.00
IUUC-Mmu-063592 Mus musculus 97.52 0.00e+00 1645.00
IUUC-Mac-065446 Musa acuminata 41.55 0.00e+00 658.00
IUUC-Mpu-066082 Mustela putorius furo 94.58 0.00e+00 1578.00
IUUC-Mlu-067345 Myotis lucifugus 96.59 0.00e+00 1619.00
IUUC-Nfi-068558 Neosartorya fischeri 35.01 6.00e-123 434.00
IUUC-Ncr-068960 Neurospora crassa 35.03 9.00e-117 414.00
IUUC-Nle-070173 Nomascus leucogenys 94.58 0.00e+00 1578.00
IUUC-Opr-070556 Ochotona princeps 96.82 0.00e+00 1640.00
IUUC-Ont-071502 Oreochromis niloticus 64.43 0.00e+00 1085.00
IUUC-Ocu-074861 Oryctolagus cuniculus 94.93 0.00e+00 1591.00
IUUC-Oba-075109 Oryza barthii 45.90 0.00e+00 720.00
IUUC-Obr-076292 Oryza brachyantha 47.20 0.00e+00 714.00
IUUC-Ogl-077065 Oryza glaberrima 47.20 0.00e+00 750.00
IUUC-Ogu-078776 Oryza glumaepatula 45.78 0.00e+00 732.00
IUUC-Oin-080048 Oryza indica 47.08 0.00e+00 746.00
IUUC-Olo-080711 Oryza longistaminata 44.18 0.00e+00 662.00
IUUC-Ome-081506 Oryza meridionalis 45.22 0.00e+00 674.00
IUUC-Oni-082320 Oryza nivara 45.36 0.00e+00 719.00
IUUC-Opu-083801 Oryza punctata 46.20 0.00e+00 712.00
IUUC-Oru-085139 Oryza rufipogon 45.36 0.00e+00 720.00
IUUC-Osa-085713 Oryza sativa 47.31 0.00e+00 753.00
IUUC-Ola-086951 Oryzias latipes 65.34 0.00e+00 1081.00
IUUC-Olu-087822 Ostreococcus lucimarinus 41.50 0.00e+00 632.00
IUUC-Oga-088625 Otolemur garnettii 97.76 0.00e+00 1637.00
IUUC-Oar-089995 Ovis aries 97.18 0.00e+00 1634.00
IUUC-Ptr-090640 Pan troglodytes 95.05 0.00e+00 1630.00
IUUC-Pan-091974 Papio anubis 97.29 0.00e+00 1628.00
IUUC-Psi-093957 Pelodiscus sinensis 89.43 0.00e+00 1595.00
IUUC-Pma-094242 Petromyzon marinus 71.47 2.00e-165 574.00
IUUC-Pno-094835 Phaeosphaeria nodorum 34.98 6.00e-107 381.00
IUUC-Ppa-095901 Physcomitrella patens 48.56 0.00e+00 782.00
IUUC-Pfo-097148 Poecilia formosa 65.78 0.00e+00 1099.00
IUUC-Pab-098068 Pongo abelii 89.86 0.00e+00 1464.00
IUUC-Pop-098943 Populus trichocarpa 46.85 0.00e+00 722.00
IUUC-Pca-100738 Procavia capensis 98.17 0.00e+00 1143.00
IUUC-Ppe-101315 Prunus persica 46.86 0.00e+00 727.00
IUUC-Pva-102154 Pteropus vampyrus 96.23 0.00e+00 1618.00
IUUC-Pgr-103343 Puccinia graminis 33.33 3.00e-109 389.00
IUUC-Ptt-103928 Puccinia triticina 30.40 3.00e-106 379.00
IUUC-Pte-104306 Pyrenophora teres 32.64 2.00e-104 373.00
IUUC-Pyt-104696 Pyrenophora triticirepentis 33.76 3.00e-107 382.00
IUUC-Rno-105801 Rattus norvegicus 97.17 0.00e+00 1642.00
IUUC-Sce-106304 Saccharomyces cerevisiae 28.09 4.00e-72 266.00
IUUC-Sha-107635 Sarcophilus harrisii 90.57 0.00e+00 1545.00
IUUC-Sja-107678 Schizosaccharomyces japonicus 32.33 3.00e-109 389.00
IUUC-Spo-108144 Schizosaccharomyces pombe 32.38 5.00e-113 401.00
IUUC-Smo-108848 Selaginella moellendorffii 47.36 0.00e+00 735.00
IUUC-Sit-110728 Setaria italica 47.44 0.00e+00 772.00
IUUC-Sly-111523 Solanum lycopersicum 47.04 0.00e+00 764.00
IUUC-Sbi-114419 Sorghum bicolor 46.92 0.00e+00 754.00
IUUC-Sre-115225 Sporisorium reilianum 35.39 4.00e-129 455.00
IUUC-Tgu-117346 Taeniopygia guttata 88.84 0.00e+00 1566.00
IUUC-Tru-118350 Takifugu rubripes 65.12 0.00e+00 1109.00
IUUC-Tsy-119278 Tarsius syrichta 54.34 0.00e+00 854.00
IUUC-Tni-120658 Tetraodon nigroviridis 66.20 0.00e+00 1098.00
IUUC-Tca-121585 Theobroma cacao 47.50 0.00e+00 727.00
IUUC-Tre-122043 Trichoderma reesei 34.64 4.00e-119 422.00
IUUC-Tvi-122303 Trichoderma virens 34.34 5.00e-125 441.00
IUUC-Tae-125686 Triticum aestivum 46.72 0.00e+00 734.00
IUUC-Tur-126732 Triticum urartu 44.25 0.00e+00 689.00
IUUC-Tme-126909 Tuber melanosporum 35.14 7.00e-120 424.00
IUUC-Tbe-127261 Tupaia belangeri 90.86 0.00e+00 1041.00
IUUC-Ttr-128295 Tursiops truncatus 54.95 0.00e+00 885.00
IUUC-Uma-129599 Ustilago maydis 34.34 3.00e-132 465.00
IUUC-Vda-129688 Verticillium dahliae 33.57 4.00e-120 425.00
IUUC-Vpa-130170 Vicugna pacos 51.45 0.00e+00 787.00
IUUC-Vvi-131116 Vitis vinifera 47.04 0.00e+00 705.00
IUUC-Xtr-131953 Xenopus tropicalis 78.60 0.00e+00 1354.00
IUUC-Xma-133837 Xiphophorus maculatus 66.01 0.00e+00 1103.00
IUUC-Yli-134510 Yarrowia lipolytica 35.57 8.00e-130 457.00
IUUC-Zma-135786 Zea mays 46.92 0.00e+00 722.00
Created Date 25-Jun-2017

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