iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tae-125263

Ensembl Protein ID

TRIAE_CS42_2DL_TGACv1_158008_AA0505750.1

UniProt Accession

A0A1D5UGT5; A0A1D5UGT5_WHEAT

Protein Name

Katanin p80 WD40 repeat-containing subunit B1 homolog

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIAE_CS42_2DL_TGACv1_158008_AA0505750	TRIAE_CS42_2DL_TGACv1_158008_AA0505750.1	TRIAE_CS42_2DL_TGACv1_158008_AA0505750.1
TRIAE_CS42_2DL_TGACv1_158008_AA0505750	TRIAE_CS42_2DL_TGACv1_158008_AA0505750.2	TRIAE_CS42_2DL_TGACv1_158008_AA0505750.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.70e-36	124.2	143	181
UBD/Beta-Prp	1.70e-56	194.2	16	278

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gHt +v++++f +d + +vsG+ D  +k+WDl+ g+ll+
   Q: 143  GHTRGVNAIRFtPDgRWVVSGGEDSAVKIWDLTAGKLLH 181
           8***********99999******************9987 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkf.spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrt 75
           +h s ++c+k+  + +++l+tg++d+++ +w + +++ ++sl gh+++v +v f++++ + + g+  +t
   Q: 16   AHASNVNCLKIgRKTSRVLVTGGEDHKVNLWAIGKPNSISSLPGHTSAVESVAFDSTEVFVAAGAASGT 84
           68889999***999********************************************9999******* PP
   S: 76   ikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvv 144
           +k+wdl+  k+v+tl+gh ++ +s++f+p g++++sGs d  +++wd++ + c++ t +gh++ vn ++
   Q: 85   VKLWDLEEAKIVRTLTGHRSNCMSVDFHPFGEFFASGSLDTNLKIWDIRRKGCIH-TYKGHTRGVNAIR 152
           *******************************************************.************* PP
   S: 145  vhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtge 213
           + pdg+ +vsG+ D++v++Wdl  gkll+++++ h++++++++f++  + l++gs d+tvk+wdl+t e
   Q: 153  FTPDGRWVVSGGEDSAVKIWDLTAGKLLHEFKS-HEGQIQCIDFHPHEFLLATGSADKTVKFWDLETFE 220
           ********************************9.*********************************** PP
   S: 214  cvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvav 272
            + +     + v+s+ f p++  l++g  ++s++++  +   +  t+    s+++   v
   Q: 221  LIGSTGPEMTGVRSMTFNPDGRSLLCG-LHESLKVFSWEPIRCHDTVDVGWSRLSDLNV 278
           ******************999999999.5888888766666666666666655555555 PP

Organism

Triticum aestivum

Functional Description
(View)

May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.

Protein Sequence
(Fasta)

MTTNTKRAYK LQEFVAHASN VNCLKIGRKT SRVLVTGGED HKVNLWAIGK PNSISSLPGH 60
TSAVESVAFD STEVFVAAGA ASGTVKLWDL EEAKIVRTLT GHRSNCMSVD FHPFGEFFAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAGCAAGAT CCATCTTAAT GAGTGAGCCA TCCAGGTCCA GCCCCGGAGC GGAGGGACCC 60
TTTGTTAATT CAAAATTTTC GACGCAGCCC CGTCTTCCTC CTCCTGGAGC CGAGCCGCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0206--Cytoskeleton
KW-0493--Microtubule
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR026962--Katanin_bsu1
IPR028021--Katanin_C-terminal
IPR002469--Peptidase_S9B_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF13925--Katanin_con80
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0008352--C:katanin complex
GO:0005874--C:microtubule
GO:0051013--P:microtubule severing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000954	Aegilops tauschii	86.06	0.00e+00	1609.00
IUUC-Aml-002187	Ailuropoda melanoleuca	52.92	8.00e-101	362.00
IUUC-Aly-005711	Arabidopsis lyrata	64.01	3.00e-180	626.00
IUUC-Bgr-012225	Blumeria graminis	30.00	9.00e-29	122.00
IUUC-Bta-012527	Bos taurus	53.57	6.00e-104	372.00
IUUC-Bra-017390	Brassica rapa	75.33	2.00e-176	613.00
IUUC-Cja-019706	Callithrix jacchus	53.57	1.00e-103	370.00
IUUC-Cfa-020139	Canis familiaris	45.88	1.00e-96	348.00
IUUC-Cpo-021710	Cavia porcellus	53.25	8.00e-104	371.00
IUUC-Cre-022746	Chlamydomonas reinhardtii	44.95	2.00e-82	300.00
IUUC-Csa-023546	Chlorocebus sabaeus	53.63	8.00e-100	358.00
IUUC-Dno-029314	Dasypus novemcinctus	53.90	2.00e-103	370.00
IUUC-Dor-030482	Dipodomys ordii	53.57	3.00e-104	373.00
IUUC-Dme-032188	Drosophila melanogaster	36.58	2.00e-58	221.00
IUUC-Eca-034143	Equus caballus	53.51	9.00e-101	361.00
IUUC-Gma-044134	Glycine max	71.82	0.00e+00	642.00
IUUC-Ggo-044761	Gorilla gorilla	53.57	2.00e-103	370.00
IUUC-Hsa-045698	Homo sapiens	51.36	7.00e-104	372.00
IUUC-Itr-048697	Ictidomys tridecemlineatus	53.57	4.00e-104	372.00
IUUC-Laf-054587	Loxodonta africana	53.57	7.00e-104	372.00
IUUC-Mcc-055851	Macaca mulatta	53.57	2.00e-103	370.00
IUUC-Meu-056704	Macropus eugenii	54.18	2.00e-104	373.00
IUUC-Mtr-058053	Medicago truncatula	74.89	0.00e+00	669.00
IUUC-Mmr-061154	Microcebus murinus	53.57	1.00e-103	371.00
IUUC-Mdo-062365	Monodelphis domestica	54.18	1.00e-103	370.00
IUUC-Mmu-063754	Mus musculus	53.85	8.00e-104	372.00
IUUC-Mpu-066245	Mustela putorius furo	54.22	2.00e-104	373.00
IUUC-Mlu-067692	Myotis lucifugus	53.69	1.00e-102	368.00
IUUC-Nle-070051	Nomascus leucogenys	53.25	1.00e-102	367.00
IUUC-Opr-070855	Ochotona princeps	53.85	7.00e-104	372.00
IUUC-Ont-071883	Oreochromis niloticus	50.83	4.00e-98	352.00
IUUC-Oan-073293	Ornithorhynchus anatinus	54.45	8.00e-101	361.00
IUUC-Oba-075448	Oryza barthii	63.44	0.00e+00	1052.00
IUUC-Oni-082640	Oryza nivara	63.44	0.00e+00	1052.00
IUUC-Oru-084609	Oryza rufipogon	63.44	0.00e+00	1052.00
IUUC-Oga-087964	Otolemur garnettii	53.85	1.00e-103	371.00
IUUC-Oar-089483	Ovis aries	53.25	8.00e-102	365.00
IUUC-Ptr-091387	Pan troglodytes	51.36	6.00e-104	372.00
IUUC-Pan-092623	Papio anubis	53.57	2.00e-103	370.00
IUUC-Ppa-095379	Physcomitrella patens	78.96	8.00e-154	538.00
IUUC-Pab-097564	Pongo abelii	53.57	3.00e-103	369.00
IUUC-Pop-099149	Populus trichocarpa	65.29	0.00e+00	668.00
IUUC-Pca-100357	Procavia capensis	57.84	3.00e-76	280.00
IUUC-Ppe-101237	Prunus persica	75.38	0.00e+00	692.00
IUUC-Pva-102397	Pteropus vampyrus	49.35	3.00e-91	330.00
IUUC-Rno-105349	Rattus norvegicus	53.85	5.00e-104	372.00
IUUC-Sly-111307	Solanum lycopersicum	71.40	0.00e+00	653.00
IUUC-Stu-112462	Solanum tuberosum	68.37	5.00e-180	624.00
IUUC-Sar-112953	Sorex araneus	46.05	3.00e-58	220.00
IUUC-Ssc-115949	Sus scrofa	47.37	3.00e-48	187.00
IUUC-Tsy-119036	Tarsius syrichta	60.33	5.00e-40	159.00
IUUC-Tca-121185	Theobroma cacao	53.13	0.00e+00	907.00
IUUC-Ttr-128172	Tursiops truncatus	53.57	4.00e-104	372.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence