iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016621

Ensembl Protein ID

Bra030555.1-P

UniProt Accession

M4EP35; M4EP35_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra030555	Bra030555.1	Bra030555.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-09	38.1	109	138

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 10   af.sd.tllvsGsdDgtikvWDlrtgvllk 37
           af sd ++l+s  +D+t+k+ D  tg++lk
   Q: 109  AFsSDgRTLASTHGDHTVKIIDCETGKCLK 138
           68888899********************97 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MTESIWSHDQ PPPPPPLVPS PKPVARQRSR SVFRLLVQRE ISPKTKSVPR KRWGVRRCDT 60
SDSPCGTSSE TVSEQRHNLI SWVEAESLQH LSADYCPLVP PPRSTIAAAF SSDGRTLAST 120

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Nucleotide Sequence
(Fasta)

ATGACAGAAT CCATCTGGTC ACACGATCAA CCTCCTCCTC CTCCGCCGCT GGTTCCTTCA 60
CCAAAGCCAG TGGCTCGCCA AAGGTCAGAG CTTTCTTAGA ATTGAAGTAG AACCCTTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002557	Amborella trichopoda	48.82	2.00e-108	386.00
IUUC-Bol-015585	Brassica oleracea	95.96	0.00e+00	1297.00
IUUC-Olu-087735	Ostreococcus lucimarinus	42.96	3.00e-54	206.00
IUUC-Ppa-095890	Physcomitrella patens	66.80	6.00e-92	332.00
IUUC-Ppe-101783	Prunus persica	58.24	0.00e+00	818.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence