iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121568

Ensembl Protein ID

EOX94260

UniProt Accession

A0A061DNK2; A0A061DNK2_THECC

Genbank Protein ID

EOX94259.1; EOX94260.1

Protein Name

Transducin family protein / WD-40 repeat family protein isoform 1

Genbank Nucleotide ID

CM001879; CM001879

Gene Name

TCM_003819

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_003819	EOX94260	EOX94260
TCM_003819	EOX94262	EOX94262

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.50e-09	36.9	146	176

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 9    laf....sdtllvsGsdDgtikvWDlrtgvll 36
           ++f    +  +l+sGs D+++++WD +t  ++
   Q: 146  VRFnpahP-EILASGSLDHQVRLWDAKTAECI 176
           56665533.899*************9998886 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MTGHPWPLDQ VSLQFQSSTN LHRSGKNVLH LLGKREVSPR TKYAPERRWG EAPKQNANSS 60
SGPNIEPIGD ARRGLISWAE EESLRHLSGK YCPLVPPPRS TIAAAFSPDG RTLASTHGDH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTTTGTCAC CGTTTCAAAC CCCCGAGATC AACTAACATT ACCAAAACCC AGAGCCAAGC 60
CAACGGAAGA CAAGAGGGAT TTAGCACTTG GTTTCCCCAT CGAGATCTCG AAAGAGAAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005774	Arabidopsis lyrata	60.15	0.00e+00	898.00
IUUC-Ath-007656	Arabidopsis thaliana	59.39	0.00e+00	856.00
IUUC-Bol-015585	Brassica oleracea	57.04	0.00e+00	817.00
IUUC-Bra-016621	Brassica rapa	58.09	0.00e+00	826.00
IUUC-Gma-044022	Glycine max	65.68	0.00e+00	1008.00
IUUC-Lpe-051045	Leersia perrieri	49.47	0.00e+00	699.00
IUUC-Mtr-058484	Medicago truncatula	63.35	0.00e+00	949.00
IUUC-Opu-084041	Oryza punctata	47.03	1.00e-180	625.00
IUUC-Olu-087735	Ostreococcus lucimarinus	51.83	2.00e-54	206.00
IUUC-Pop-099626	Populus trichocarpa	68.95	0.00e+00	1010.00
IUUC-Ppe-101783	Prunus persica	66.75	0.00e+00	981.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence