iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006182

UUCD1 version

UUC-ArL-00924

Ensembl Protein ID

fgenesh1_pm.C_scaffold_2000802

UniProt Accession

D7KVL0; D7KVL0_ARALL

Genbank Protein ID

EFH63387.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

GL348714

Gene Name

ARALYDRAFT_315769

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pm.C_scaffold_2000802	fgenesh1_pm.C_scaffold_2000802	fgenesh1_pm.C_scaffold_2000802

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.90e-31	107.3	277	349

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +pee++CpIsl+lM+dPv+++sG+ty+r +Iekw+++g++tcP+t+q+l + +l+Pn+ ++ li +wce+n+ 
   Q: 277  PPEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHLSLTPNNCVKGLIASWCEQNGT 349
           69********************************************************************985 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MDVTELEENL FAASDAKLHG DMCKELSGVL CKVLSIFPSL EGARPRSKSG IQALCSLHIA 60
LEKAKNILQH CSECSKLYLA ITGDAVLLKF EKAKIALIDG LKRVEDIVPS SIGSQILEIV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATGTGA CAGAGCTTGA GGAGAATTTA TTCGCGGCTA GCGATGCTAA GGTTCGGTTA 60
TAAATTGAAA TGTTTTGATT TCGAATTGTA ATTGTTGGAA TTATCTGATT AGATCATATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

aly:ARALYDRAFT_315769

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002816	Amborella trichopoda	56.32	0.00e+00	745.00
IUUC-Ath-006645	Arabidopsis thaliana	95.17	0.00e+00	1471.00
IUUC-Bol-015502	Brassica oleracea	87.66	0.00e+00	1363.00
IUUC-Bra-017800	Brassica rapa	88.04	0.00e+00	1375.00
IUUC-Gma-043476	Glycine max	67.38	0.00e+00	996.00
IUUC-Mtr-058026	Medicago truncatula	65.99	0.00e+00	932.00
IUUC-Mac-064644	Musa acuminata	54.02	0.00e+00	704.00
IUUC-Olo-080879	Oryza longistaminata	55.93	0.00e+00	761.00
IUUC-Pop-100088	Populus trichocarpa	68.39	0.00e+00	1051.00
IUUC-Ppe-101913	Prunus persica	68.88	0.00e+00	1047.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence