iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111655

Ensembl Protein ID

Solyc01g107360.2.1

UniProt Accession

K4B2V3; K4B2V3_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc01g107360.2	Solyc01g107360.2.1	Solyc01g107360.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.10e-12	46.3	606	639

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           H + ++ ++f  ++  +++++s D  +k+WDlr+
   Q: 606  HREHINVVKFahHSpSIFATSSFDRDVKLWDLRQ 639
           777789999998444889*************987 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MTTTNISSLE TRYMYSCQAR GVPPNKQVLS ALFKAKLKKA RHEVSILVIL LDDIKDADFH 60
PLLDLLTEAD LSEIDAVDII NRSVCILSWE YLLALMRVSS RKLRVVDIQD ILFGKDFLLD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTTGATTC GAAAAATTGC TTCTTCGCAT GTAACGGCCA ACTGTATCGG AGTAATCTAG 60
TCGATCATCG GAACTTTGTA GTAATCGCAC TCACCGTCTT CCCCGCTGTT ATCATCGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032675--L_dom-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0071493--P:cellular response to UV-B

KEGG

sly:101246386

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005966	Arabidopsis lyrata	52.76	0.00e+00	741.00
IUUC-Ath-007257	Arabidopsis thaliana	53.07	0.00e+00	738.00
IUUC-Bol-016080	Brassica oleracea	53.70	0.00e+00	808.00
IUUC-Bra-017152	Brassica rapa	54.06	0.00e+00	802.00
IUUC-Cme-027163	Cyanidioschyzon merolae	36.69	4.00e-75	275.00
IUUC-Gma-044343	Glycine max	62.52	0.00e+00	914.00
IUUC-Mtr-057634	Medicago truncatula	58.23	0.00e+00	907.00
IUUC-Mac-065375	Musa acuminata	51.78	0.00e+00	772.00
IUUC-Ppa-095407	Physcomitrella patens	52.95	5.00e-154	537.00
IUUC-Pop-099267	Populus trichocarpa	63.04	0.00e+00	967.00
IUUC-Ppe-101596	Prunus persica	64.27	0.00e+00	903.00
IUUC-Smo-108795	Selaginella moellendorffii	54.04	4.00e-136	477.00
IUUC-Stu-111974	Solanum tuberosum	97.17	0.00e+00	1467.00
IUUC-Tca-121812	Theobroma cacao	63.29	0.00e+00	981.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence