iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oni-082508

Ensembl Protein ID

ONIVA07G11200.2

UniProt Accession

A0A0E0I057; A0A0E0I057_ORYNI

Protein Name

Ribosome biogenesis protein BOP1 homolog

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ONIVA07G11200	ONIVA07G11200.1	ONIVA07G11200.1
ONIVA07G11200	ONIVA07G11200.2	ONIVA07G11200.2
ONIVA07G11200	ONIVA07G11200.3	ONIVA07G11200.3
ONIVA07G11200	ONIVA07G11200.4	ONIVA07G11200.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.90e-12	46.1	343	381

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH+++v +l+   ++  ++sGs Dgti+vW++ tg+++k
   Q: 343  GHNGPVKSLSVeaTGQWIASGSSDGTIRVWEVETGRCIK 381
           8*********9976699********************87 PP

Organism

Oryza nivara

Functional Description
(View)

Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit.

Protein Sequence
(Fasta)

MGHSDGDHGS DLSADDSPWS EGSWSDDDDE GSLSFEDSGE GSDAESDEPD APAVEESDSS 60
EDEVAPRNTI GDVPLEWYKN EEHIGYDITG SKIKKRDREG RIEAYLRNAD DAKNWRKIYD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGCACA GCGACGGCGA CCACGGTAGC GACCTCTCCG CCGACGATTC CCCGTGGAGC 60
GAGGGGAGCT GGTCCGACGA CGATGACGAG GTGCGGCTCT CCTCTTCGAA GGATTTCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0030687--C:preribosome, large subunit precursor
GO:0043021--F:ribonucleoprotein complex binding
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	75.89	0.00e+00	877.00
IUUC-Aml-001507	Ailuropoda melanoleuca	39.87	2.00e-124	439.00
IUUC-Atr-003141	Amborella trichopoda	65.48	6.00e-161	560.00
IUUC-Apl-003545	Anas platyrhynchos	38.43	2.00e-111	395.00
IUUC-Aly-005649	Arabidopsis lyrata	61.37	0.00e+00	788.00
IUUC-Ath-007625	Arabidopsis thaliana	59.64	0.00e+00	766.00
IUUC-Ago-007958	Ashbya gossypii	38.60	2.00e-127	449.00
IUUC-Acl-008344	Aspergillus clavatus	40.15	5.00e-112	398.00
IUUC-Afl-008616	Aspergillus flavus	38.31	1.00e-112	400.00
IUUC-Afu-009083	Aspergillus fumigatus	39.69	5.00e-106	378.00
IUUC-Ani-009365	Aspergillus nidulans	38.37	3.00e-112	398.00
IUUC-Ang-009796	Aspergillus niger	38.49	1.00e-108	387.00
IUUC-Aor-010015	Aspergillus oryzae	38.31	1.00e-112	400.00
IUUC-Ate-010537	Aspergillus terreus	37.38	3.00e-116	412.00
IUUC-Ame-011767	Astyanax mexicanus	41.67	9.00e-55	206.00
IUUC-Bgr-012286	Blumeria graminis	39.76	1.00e-123	436.00
IUUC-Bta-013569	Bos taurus	43.25	1.00e-139	489.00
IUUC-Bci-013820	Botrytis cinerea	39.02	4.00e-114	405.00
IUUC-Bdi-014895	Brachypodium distachyon	78.18	0.00e+00	1027.00
IUUC-Bol-016099	Brassica oleracea	63.31	0.00e+00	818.00
IUUC-Bra-017174	Brassica rapa	63.21	0.00e+00	825.00
IUUC-Cel-018201	Caenorhabditis elegans	38.09	2.00e-113	402.00
IUUC-Cja-019009	Callithrix jacchus	40.30	3.00e-127	448.00
IUUC-Cfa-020173	Canis familiaris	40.28	4.00e-129	454.00
IUUC-Cpo-021796	Cavia porcellus	42.97	2.00e-137	482.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	46.62	3.00e-154	538.00
IUUC-Csa-023440	Chlorocebus sabaeus	42.44	2.00e-142	498.00
IUUC-Cin-025782	Ciona intestinalis	43.03	2.00e-138	485.00
IUUC-Csv-026352	Ciona savignyi	43.26	1.00e-87	317.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	34.19	8.00e-92	330.00
IUUC-Cne-027004	Cryptococcus neoformans	41.70	6.00e-137	481.00
IUUC-Cme-027242	Cyanidioschyzon merolae	33.28	2.00e-92	332.00
IUUC-Dre-028658	Danio rerio	43.58	8.00e-148	517.00
IUUC-Dno-028883	Dasypus novemcinctus	43.23	2.00e-140	492.00
IUUC-Dor-031031	Dipodomys ordii	41.36	1.00e-139	489.00
IUUC-Dse-031443	Dothistroma septosporum	35.84	2.00e-105	375.00
IUUC-Dme-031786	Drosophila melanogaster	41.05	6.00e-139	487.00
IUUC-Eca-033677	Equus caballus	42.95	2.00e-138	485.00
IUUC-Eeu-035310	Erinaceus europaeus	38.89	1.00e-98	353.00
IUUC-Fca-035888	Felis catus	41.05	2.00e-132	466.00
IUUC-Fal-037438	Ficedula albicollis	43.84	1.00e-117	416.00
IUUC-Fox-037973	Fusarium oxysporum	38.64	2.00e-124	439.00
IUUC-Fso-038187	Fusarium solani	37.63	4.00e-121	428.00
IUUC-Gmo-039114	Gadus morhua	41.09	2.00e-125	442.00
IUUC-Ggr-039746	Gaeumannomyces graminis	38.34	7.00e-130	457.00
IUUC-Gga-040631	Gallus gallus	44.57	9.00e-79	286.00
IUUC-Gac-042582	Gasterosteus aculeatus	42.00	2.00e-131	462.00
IUUC-Gma-044215	Glycine max	60.43	0.00e+00	796.00
IUUC-Ggo-045587	Gorilla gorilla	42.60	5.00e-142	497.00
IUUC-Hsa-046319	Homo sapiens	42.60	5.00e-142	497.00
IUUC-Hvu-047526	Hordeum vulgare	77.21	0.00e+00	1002.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	43.16	1.00e-138	486.00
IUUC-Kpa-049221	Komagataella pastoris	38.14	6.00e-119	421.00
IUUC-Lch-049640	Latimeria chalumnae	42.38	2.00e-148	519.00
IUUC-Lpe-051135	Leersia perrieri	87.77	0.00e+00	1028.00
IUUC-Loc-051930	Lepisosteus oculatus	44.48	7.00e-148	516.00
IUUC-Lma-053290	Leptosphaeria maculans	38.86	7.00e-113	400.00
IUUC-Laf-053903	Loxodonta africana	41.31	3.00e-128	452.00
IUUC-Mcc-055471	Macaca mulatta	42.60	2.00e-143	502.00
IUUC-Meu-056190	Macropus eugenii	42.93	1.00e-139	489.00
IUUC-Mor-057135	Magnaporthe oryzae	37.50	1.00e-120	426.00
IUUC-Mpo-057475	Magnaporthe poae	37.16	6.00e-120	424.00
IUUC-Mtr-058689	Medicago truncatula	58.65	0.00e+00	758.00
IUUC-Mla-059149	Melampsora laricipopulina	40.22	2.00e-129	455.00
IUUC-Mga-059645	Meleagris gallopavo	38.31	3.00e-41	160.00
IUUC-Mvi-060485	Microbotryum violaceum	39.29	2.00e-119	424.00
IUUC-Mmr-061674	Microcebus murinus	42.83	7.00e-134	470.00
IUUC-Mdo-062973	Monodelphis domestica	41.74	2.00e-144	505.00
IUUC-Mmu-064180	Mus musculus	41.29	6.00e-142	497.00
IUUC-Mac-064535	Musa acuminata	51.94	0.00e+00	751.00
IUUC-Mpu-066406	Mustela putorius furo	42.90	2.00e-145	508.00
IUUC-Mlu-067795	Myotis lucifugus	42.56	5.00e-131	461.00
IUUC-Nfi-068516	Neosartorya fischeri	38.17	3.00e-100	358.00
IUUC-Ncr-068767	Neurospora crassa	38.62	3.00e-115	408.00
IUUC-Opr-071084	Ochotona princeps	45.58	1.00e-63	236.00
IUUC-Ont-071614	Oreochromis niloticus	42.10	5.00e-142	497.00
IUUC-Oba-075980	Oryza barthii	91.36	0.00e+00	1094.00
IUUC-Obr-076799	Oryza brachyantha	90.27	0.00e+00	1162.00
IUUC-Ogl-077134	Oryza glaberrima	93.22	0.00e+00	1152.00
IUUC-Ogu-078655	Oryza glumaepatula	94.04	0.00e+00	1152.00
IUUC-Oin-079654	Oryza indica	93.22	0.00e+00	1122.00
IUUC-Olo-080706	Oryza longistaminata	91.95	0.00e+00	1102.00
IUUC-Ome-081716	Oryza meridionalis	88.47	0.00e+00	1055.00
IUUC-Opu-083707	Oryza punctata	90.76	0.00e+00	1078.00
IUUC-Oru-084453	Oryza rufipogon	91.95	0.00e+00	1102.00
IUUC-Osa-085811	Oryza sativa	93.22	0.00e+00	1152.00
IUUC-Ola-087361	Oryzias latipes	43.83	2.00e-145	508.00
IUUC-Oga-088015	Otolemur garnettii	42.86	3.00e-140	491.00
IUUC-Oar-090058	Ovis aries	37.71	3.00e-68	252.00
IUUC-Ptr-090631	Pan troglodytes	42.35	6.00e-55	207.00
IUUC-Pan-092306	Papio anubis	42.54	1.00e-141	496.00
IUUC-Pma-094622	Petromyzon marinus	42.88	6.00e-145	507.00
IUUC-Pno-094794	Phaeosphaeria nodorum	35.24	8.00e-102	363.00
IUUC-Ppa-095528	Physcomitrella patens	54.41	4.00e-152	531.00
IUUC-Pfo-096682	Poecilia formosa	42.05	1.00e-142	499.00
IUUC-Pab-097939	Pongo abelii	42.78	1.00e-129	456.00
IUUC-Pop-099043	Populus trichocarpa	65.48	0.00e+00	749.00
IUUC-Pca-100333	Procavia capensis	42.12	6.00e-139	487.00
IUUC-Ppe-102078	Prunus persica	61.29	0.00e+00	764.00
IUUC-Pgr-103525	Puccinia graminis	41.42	4.00e-121	428.00
IUUC-Ptt-103929	Puccinia triticina	41.57	8.00e-116	410.00
IUUC-Pte-104029	Pyrenophora teres	38.77	8.00e-123	434.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	38.62	3.00e-122	432.00
IUUC-Rno-105248	Rattus norvegicus	43.94	7.00e-141	493.00
IUUC-Sce-106381	Saccharomyces cerevisiae	38.21	5.00e-125	441.00
IUUC-Sha-106519	Sarcophilus harrisii	44.44	3.00e-145	508.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	38.99	4.00e-115	408.00
IUUC-Spo-108071	Schizosaccharomyces pombe	38.11	4.00e-114	405.00
IUUC-Smo-108881	Selaginella moellendorffii	58.09	0.00e+00	709.00
IUUC-Sit-110551	Setaria italica	83.74	0.00e+00	1030.00
IUUC-Sly-110970	Solanum lycopersicum	73.18	8.00e-150	523.00
IUUC-Stu-112593	Solanum tuberosum	64.15	0.00e+00	840.00
IUUC-Sar-113123	Sorex araneus	39.31	1.00e-53	202.00
IUUC-Sbi-113945	Sorghum bicolor	81.20	0.00e+00	1025.00
IUUC-Sre-115188	Sporisorium reilianum	38.33	6.00e-121	427.00
IUUC-Ssc-115352	Sus scrofa	42.23	6.00e-143	500.00
IUUC-Tru-117685	Takifugu rubripes	43.06	5.00e-142	497.00
IUUC-Tni-119982	Tetraodon nigroviridis	42.26	5.00e-136	478.00
IUUC-Tca-121664	Theobroma cacao	65.44	0.00e+00	843.00
IUUC-Tre-122229	Trichoderma reesei	38.54	2.00e-109	389.00
IUUC-Tvi-122576	Trichoderma virens	39.04	3.00e-112	399.00
IUUC-Tae-124110	Triticum aestivum	80.00	0.00e+00	950.00
IUUC-Tur-126781	Triticum urartu	76.23	0.00e+00	864.00
IUUC-Tme-127080	Tuber melanosporum	41.89	2.00e-137	482.00
IUUC-Ttr-128514	Tursiops truncatus	42.25	3.00e-90	325.00
IUUC-Uma-129556	Ustilago maydis	38.47	6.00e-119	421.00
IUUC-Vda-129715	Verticillium dahliae	40.06	2.00e-123	436.00
IUUC-Vvi-131211	Vitis vinifera	64.68	0.00e+00	820.00
IUUC-Xma-133883	Xiphophorus maculatus	41.95	9.00e-138	483.00
IUUC-Yli-134438	Yarrowia lipolytica	38.47	3.00e-116	412.00
IUUC-Zma-135341	Zea mays	66.36	0.00e+00	861.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence