iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.2__1363__AT1G71020.1	fgenesh2_kg.2__1363__AT1G71020.1	fgenesh2_kg.2__1363__AT1G71020.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.70e-31	108.8	249	321

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +pe+flCpIslelM+dP ++++G+ty+rs+I++w++ g+  cP+t+q+l++ +l+Pn++lr+li++wc ++++
   Q: 249  IPEDFLCPISLELMKDPAIVSTGQTYERSYIQRWIDCGNLRCPKTQQKLKNFTLTPNYVLRSLISQWCTKHNI 321
           8********************************************************************9986 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MAGGAITPAS LIGLISEINE VPVNFGVFKK DCADLARRVG LLTHLIEEIR DSSPPPPESD 60
ASSSLISYEC DWWSDLVVGL QAAKRLLSSA TSFQARESSD GAAKRILFQF QCVTWKLEKA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAATTCGAAT TTCAAGCCGC CGTATGCGAC GGCGTAATGG CTGGTGGAGC TATCACTCCC 60
GCTTCTCTGA TCGGTCTTAT CTCTGAAATC AATGAGGTTC CGGTGAATTT TGGGGTGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity
GO:0051865--P:protein autoubiquitination
GO:0031648--P:protein destabilization
GO:2000022--P:regulation of jasmonic acid mediated signaling pathway

KEGG

aly:ARALYDRAFT_476233

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007555	Arabidopsis thaliana	92.23	0.00e+00	1089.00
IUUC-Bdi-014341	Brachypodium distachyon	52.17	7.00e-161	560.00
IUUC-Bol-015190	Brassica oleracea	81.99	0.00e+00	969.00
IUUC-Bra-017246	Brassica rapa	80.82	0.00e+00	944.00
IUUC-Fso-038217	Fusarium solani	29.76	3.00e-17	82.80
IUUC-Gma-043730	Glycine max	64.32	0.00e+00	711.00
IUUC-Hvu-047676	Hordeum vulgare	65.07	2.00e-125	441.00
IUUC-Lpe-051513	Leersia perrieri	52.79	3.00e-160	558.00
IUUC-Mtr-058156	Medicago truncatula	62.31	0.00e+00	699.00
IUUC-Mac-065650	Musa acuminata	49.43	2.00e-151	528.00
IUUC-Obr-076820	Oryza brachyantha	66.92	2.00e-145	508.00
IUUC-Olo-080348	Oryza longistaminata	54.35	3.00e-154	537.00
IUUC-Ppe-101146	Prunus persica	60.40	0.00e+00	686.00
IUUC-Sly-111534	Solanum lycopersicum	57.71	0.00e+00	646.00
IUUC-Stu-112138	Solanum tuberosum	60.78	0.00e+00	659.00
IUUC-Sbi-114533	Sorghum bicolor	55.15	2.00e-155	541.00
IUUC-Tae-125272	Triticum aestivum	50.16	3.00e-150	524.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence