iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058000

Ensembl Protein ID

AET00035

UniProt Accession

G7K2X0; G7K2X0_MEDTR

Genbank Protein ID

AET00035.1

Protein Name

F-box/WD-40 repeat plant protein

Genbank Nucleotide ID

CM001221

Gene Name

MTR_5g087680

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_5g087680	AET00035	AET00035

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.90e-33	112.2	289	323
UBD/Beta-Prp	6.90e-40	138.5	281	510

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsd.tllvsGsdDgtikvWDlrtgvl 35
           gH ++vt+la+ d t++ sGs+D t++vWD ++ ++
   Q: 289  GHDGPVTSLAL-DlTRIYSGSWDTTVRVWDRHSMKC 323
           8**********.99****************766665 PP

UBD/Beta-Prp

   S: 42   gkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvnc 142
            k   +l gh+++vt++ ++ +   + +gs D t++vwd  + kc+++l+ h+d v+ l  +    ++vs+s  + + vwd+++g     +l+ h g +  
   Q: 281  NKNEVRLWGHDGPVTSLALDLT--RIYSGSWDTTVRVWDRHSMKCTVVLR-HSDWVWGLVPHD--TTVVSTS-GSNVYVWDTNSGNLATVVLNAHVGNTYA 375
           44477999**************..69************************.******998888..7788877.45799********9999*********** PP
   S: 143  vvvhpdgnllvsGslDrtvrlWdl......ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlq.............tgec.......... 214
           ++ + +g+ +++G+ D+ + ++ +        +  + t+   h ++vysl+f+   + lvs+s dg++ l d++             +  +          
   Q: 376  LARSHTGDFIFTGGEDGSIHMYEIvdgsyvTEALHVATWDP-HSGPVYSLAFEF--PWLVSASSDGKLALIDVRkllrrskraigkrA--Tkakysgevnv 471
           ************************77777655666777787.***********9..99****************99998666655550..04455555588 PP
   S: 215  ...vrtlnghtdnvksvrfspnderlvsgssDgsiriWdlr 252
               r l+g ++n  sv      +r+v+g+++g++riW+ +
   Q: 472  eppQRMLHGFKSNLFSVGIG--ADRIVCGGEEGVVRIWNFT 510
           88888888888999988888..****************965 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MAFDCPQSIK VSQNLVENPG ISIDIVELNP KPNSKAISIS FPDFVTNTKS ESGKGEIFKG 60
KSKLNSKKGI KAASAGALNQ SSVPGDVVIG NCRSITDLPP VLISEILNCL DPKELGIVSC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCATTCATT CTTTTTAGTT TTTAGTATAT CCCTTCTTTG ACCGAATTAA CCACACAAAC 60
CCTTTTCACT CTCTCTTCAC CACTCATCTC TTTTTCAAGG TATTTTCACC CTCTAATTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001810--F-box_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50181--FBOX
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00646--F-box
PF00400--WD40

SMART

SM00256--FBOX
SM00320--WD40

Gene Ontology

GO:0016036--P:cellular response to phosphate starvation

KEGG

mtr:MTR_5g087680

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000413	Aegilops tauschii	53.59	8.00e-169	586.00
IUUC-Atr-002870	Amborella trichopoda	51.71	1.00e-137	483.00
IUUC-Aly-005424	Arabidopsis lyrata	61.50	0.00e+00	640.00
IUUC-Ath-007005	Arabidopsis thaliana	66.46	0.00e+00	643.00
IUUC-Bdi-014622	Brachypodium distachyon	50.93	2.00e-171	594.00
IUUC-Bol-016449	Brassica oleracea	65.23	0.00e+00	632.00
IUUC-Bra-017684	Brassica rapa	64.80	5.00e-129	452.00
IUUC-Gma-044132	Glycine max	75.43	0.00e+00	847.00
IUUC-Hvu-047789	Hordeum vulgare	54.14	4.00e-171	593.00
IUUC-Lpe-051245	Leersia perrieri	56.35	3.00e-159	554.00
IUUC-Mac-065354	Musa acuminata	60.49	6.00e-170	590.00
IUUC-Oba-074979	Oryza barthii	54.39	5.00e-167	580.00
IUUC-Obr-076615	Oryza brachyantha	58.40	1.00e-170	592.00
IUUC-Ogl-077075	Oryza glaberrima	54.39	3.00e-167	581.00
IUUC-Ogu-078476	Oryza glumaepatula	54.39	2.00e-167	581.00
IUUC-Oin-079267	Oryza indica	54.58	7.00e-168	583.00
IUUC-Olo-080272	Oryza longistaminata	54.58	1.00e-167	582.00
IUUC-Ome-081994	Oryza meridionalis	54.58	3.00e-168	584.00
IUUC-Oni-082607	Oryza nivara	54.58	7.00e-168	583.00
IUUC-Opu-083533	Oryza punctata	54.41	4.00e-169	587.00
IUUC-Oru-084485	Oryza rufipogon	57.49	5.00e-167	580.00
IUUC-Osa-085675	Oryza sativa	54.58	8.00e-168	582.00
IUUC-Ppa-095179	Physcomitrella patens	43.37	1.00e-110	392.00
IUUC-Pop-099631	Populus trichocarpa	61.72	0.00e+00	679.00
IUUC-Ppe-102090	Prunus persica	63.40	0.00e+00	723.00
IUUC-Smo-108901	Selaginella moellendorffii	44.47	4.00e-105	374.00
IUUC-Sit-110702	Setaria italica	53.00	5.00e-168	583.00
IUUC-Sly-110878	Solanum lycopersicum	58.66	0.00e+00	644.00
IUUC-Stu-112399	Solanum tuberosum	58.69	0.00e+00	634.00
IUUC-Sbi-114384	Sorghum bicolor	57.06	8.00e-159	553.00
IUUC-Tca-121388	Theobroma cacao	65.86	0.00e+00	719.00
IUUC-Tae-123207	Triticum aestivum	53.41	2.00e-169	588.00
IUUC-Tur-126520	Triticum urartu	53.42	4.00e-168	584.00
IUUC-Vvi-131268	Vitis vinifera	68.17	0.00e+00	654.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence