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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Ath-007652
UUCD1 version UUC-ArT-01723
Ensembl Protein ID AT4G22350.2
UniProt Accession Q8W0Z4; Q8W0Z4_ARATH
Genbank Protein ID AAL58942.1; AAQ22640.1; AEE84598.1
Protein Name AT4g22410/F7K2_7; At4g22410/F7K2_7; Ubiquitin C-terminal hydrolases superfamily protein
Genbank Nucleotide ID AF462856; BT010171; CP002687
Gene Name At4g22350; T10I14.180; T10I14_180
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT4G22350 AT4G22350.1 AT4G22350.1
AT4G22350 AT4G22350.3 AT4G22350.3
AT4G22350 AT4G22350.2 AT4G22350.2
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
DUB/USP 1.10e-39 137.5 229 537
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaee.fsgyeqqDaqEf 95
    +Gl+N++ t ++N ++Q+L+ +++lr+++l +e+ + + k +l + + +l +++w + k++vsp+e+l+a+ k++++ f+ +q D Ef
   Q: 229 VGLNNIQKTEFVNVTIQSLMRVTPLRNFFLI--PENYQ-----HCKSPLGHRFGELTRKIWhaRNFKGQVSPHEFLQAVMKASKKrFRIGQQSDPVEF 319
    6******************************..55554.....45679*************999999**********998888777************ PP
   S: 96 laflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvp.........gkeetkk 184
    +++ll++l+ +l ++ k +s+i++ Fqg+l+ + +n+ ++ pfl l l++p +
   Q: 320 MSWLLNTLHMDL-------------------------RTSKDASSIIHKCFQGELEVVKEYQGNENKEISRMPFLMLGLDLPppplfkdvmE------ 386
    ************.........................678999***************************************5554332222...... PP
   S: 185 e......slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefple.Ldlspfcts....peek 271
    + l d+L++f e e + + + a+ + ++ k P++L++h+ Rf ++++ ++ek+ + v+fp + ++l+ + s pe +
   Q: 387 KniipqvALFDLLKKFDGETVTE----VVRP-----KLARMRYRVIKSPRYLMFHMVRF--KKNNFFKEKNPTLVNFPVKdMELRDYIPSlpraPE-G 472
    12333335556665555554444....2223.....3377889999*************..88999************999****88777666444.4 PP
   S: 272 qkekkkYeLiavvvHsGslssGHYvayvknekgk.WllfdDskVtevkeeevleetgstaYvlfYkrr 338
    ++++ kY+Lia +vH G+++ G + ++v+ ++++ W+++ D +V e+ + v+ s+aY+ +Y+++
   Q: 473 ENVCSKYNLIANIVHDGKPEDGYFRVFVQRKSQElWYEMQDLHVAETLPQMVEL---SEAYMQIYEQQ 537
    456***************************88889*******************...********985 PP
   

Organism Arabidopsis thaliana
Protein Sequence
(Fasta)
MKGEREVKNG VSEEEREVKR KRVMERSDSP PPPLGFNNPL LPFANAYDDD NNQQNKSQTR 60
CNVVAKGEGN GNKVKGEAQV EVDDDEDDDD DASKGRGKHS RHVEVRRDCP YLDTVNRQVL 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Ath-007652|DUB,USP|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TGTCGAATAC GTCCTTGTAG ATTTTCACGC GTTTATAGTT TGCTTCGAGA AGCTTGAGGG 60
TATTAATGGT TATTCGATAA GTATCGGATC GTGAATACAG ATCAATTACT GAATACTGCT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ath-007652|DUB,USP|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR033809--USP39
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH
PF02148--zf-UBP

SMART

SM00290--ZnF_UBP

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0000245--P:spliceosomal complex assembly

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aly-005683 Arabidopsis lyrata 90.54 0.00e+00 886.00
IUUC-Afl-008735 Aspergillus flavus 54.29 6.00e-43 167.00
IUUC-Bgr-011998 Blumeria graminis 43.35 1.00e-98 352.00
IUUC-Bol-015968 Brassica oleracea 96.65 0.00e+00 839.00
IUUC-Bra-017952 Brassica rapa 95.98 0.00e+00 833.00
IUUC-Cel-018491 Caenorhabditis elegans 45.41 2.00e-110 392.00
IUUC-Cre-022886 Chlamydomonas reinhardtii 52.80 3.00e-33 132.00
IUUC-Cin-025473 Ciona intestinalis 47.44 9.00e-35 139.00
IUUC-Cne-026802 Cryptococcus neoformans 42.83 2.00e-92 332.00
IUUC-Mla-059120 Melampsora laricipopulina 41.96 1.00e-97 350.00
IUUC-Ppa-095995 Physcomitrella patens 74.36 0.00e+00 700.00
IUUC-Pfo-096754 Poecilia formosa 51.52 1.00e-128 452.00
IUUC-Ppe-101699 Prunus persica 73.13 0.00e+00 716.00
IUUC-Sce-106368 Saccharomyces cerevisiae 27.97 3.00e-39 155.00
Created Date 25-Jun-2017

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