iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112786

Ensembl Protein ID

PGSC0003DMT400093026

UniProt Accession

M1DR36; M1DR36_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400042597	PGSC0003DMT400093026	PGSC0003DMT400093026

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.10e-50	166.7	345	383
UBD/Beta-Prp	1.40e-75	255.5	226	499

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+++++++++ ++  ll+s+s D t+k+W+++++v+l+
   Q: 345  GHKNEINAIKWdPSgSLLASCSEDTTVKIWSMKKDVCLH 383
           8***********6669*********************97 PP

UBD/Beta-Prp

   S: 11   svitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvls 99
           + +t +++  +++llatgs++g  k+w+ +   ll++l +he+++ ++k++++g++l++gs+Drt+ vw++++g+  + ++  ++  l+
   Q: 226  D-VTTLDWNSKGTLLATGSYNGQAKIWNRSG-LLLKTLNKHEGTIFSLKWNKKGDYLLSGSTDRTAVVWNVKSGESKQQFN-FNSGMLD 311
           3.55599999*****************9776.999**********************************************.99999** PP
   S: 100  lsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsf 188
           +++   +d++++Gs d+ i v ++ ++q ++  +sgh+  +n ++++p+g+ll+s+s D+tv++W++k + +l+++++ h + ++ +++
   Q: 312  VDWLD-NDSFAVGSTDNKIYVCKVGENQPVK-RFSGHKNEINAIKWDPSGSLLASCSEDTTVKIWSMKKDVCLHDFRE-HSKEINTIKW 397
           ****9.99***********************.*********************************************9.********** PP
   S: 189  dsng.........kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvi 268
           +++g           l+s+s d+tvklwd+++g+  ++lngh++ v+sv+fspn+++l+sgs D+   iW ++  +++kt+++     i
   Q: 398  SPTGagtsnpnkkLLLASASFDSTVKLWDVEQGRLFHSLNGHREVVYSVAFSPNGDYLASGSLDNCMHIWSVKDAKIVKTYKGYG--GI 484
           ***9*******988899****************************************************************9955..44 PP
   S: 269  svavlsfgdnvlvlg 283
           +  +++ ++n+++++
   Q: 485  YNVCWNKEGNKVAAC 499
           444444444444433 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MASLTSDLLN YIVFRYLQES GFLHAAFSFG HEARINKSTV DGNRIPFNAL VKLVQKGIQY 60
LELETNLSND DTDMDEDFRF LEPLDLITKN VSELQQMIKE KKEKVQKDKS NADNELDHER 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCTCTT TAACCTCCGA CCTGTTGAAT TACATTGTTT TCCGGTACCT TCAGGAATCA 60
GGTAATTCAA TTTTCATCTT CAGAACATGT ACAATCTTGT AGGATTCAAA TCATAATTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

KEGG

sot:102582475

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000916	Aegilops tauschii	67.63	5.00e-57	211.00
IUUC-Atr-002514	Amborella trichopoda	68.58	5.00e-155	539.00
IUUC-Apl-003232	Anas platyrhynchos	48.78	3.00e-142	497.00
IUUC-Aly-005622	Arabidopsis lyrata	62.28	2.00e-134	471.00
IUUC-Ath-007137	Arabidopsis thaliana	60.84	4.00e-133	467.00
IUUC-Ago-007869	Ashbya gossypii	26.44	2.00e-38	152.00
IUUC-Ame-011601	Astyanax mexicanus	49.33	2.00e-137	481.00
IUUC-Bdi-014315	Brachypodium distachyon	56.89	5.00e-178	616.00
IUUC-Bol-016277	Brassica oleracea	61.08	1.00e-138	485.00
IUUC-Bra-016944	Brassica rapa	61.52	7.00e-139	486.00
IUUC-Cja-019281	Callithrix jacchus	48.96	9.00e-145	505.00
IUUC-Cre-022979	Chlamydomonas reinhardtii	56.64	8.00e-113	399.00
IUUC-Csa-023943	Chlorocebus sabaeus	48.21	1.00e-143	501.00
IUUC-Cin-025704	Ciona intestinalis	46.57	2.00e-136	478.00
IUUC-Csv-026257	Ciona savignyi	47.10	5.00e-137	479.00
IUUC-Dre-027906	Danio rerio	48.54	9.00e-137	479.00
IUUC-Dor-030732	Dipodomys ordii	56.90	9.00e-115	405.00
IUUC-Dme-031939	Drosophila melanogaster	56.35	1.00e-115	409.00
IUUC-Ete-032822	Echinops telfairi	44.11	5.00e-117	413.00
IUUC-Eca-033897	Equus caballus	48.69	8.00e-143	499.00
IUUC-Eeu-034952	Erinaceus europaeus	43.55	1.00e-115	408.00
IUUC-Gga-041161	Gallus gallus	48.65	3.00e-135	474.00
IUUC-Gac-041851	Gasterosteus aculeatus	49.14	1.00e-143	501.00
IUUC-Gma-042880	Glycine max	60.25	0.00e+00	639.00
IUUC-Ggo-045373	Gorilla gorilla	47.96	1.00e-143	502.00
IUUC-Hsa-046373	Homo sapiens	48.88	4.00e-144	503.00
IUUC-Itr-048236	Ictidomys tridecemlineatus	56.23	1.00e-121	428.00
IUUC-Kpa-049338	Komagataella pastoris	28.02	8.00e-30	124.00
IUUC-Lch-050535	Latimeria chalumnae	49.90	6.00e-144	503.00
IUUC-Lpe-051084	Leersia perrieri	58.29	0.00e+00	634.00
IUUC-Mcc-055124	Macaca mulatta	49.03	1.00e-142	498.00
IUUC-Meu-056563	Macropus eugenii	61.34	9.00e-84	302.00
IUUC-Mtr-058624	Medicago truncatula	62.77	4.00e-149	520.00
IUUC-Mga-059660	Meleagris gallopavo	48.65	3.00e-135	474.00
IUUC-Mvi-060557	Microbotryum violaceum	36.72	9.00e-66	244.00
IUUC-Mmr-061286	Microcebus murinus	48.15	2.00e-142	497.00
IUUC-Mac-065508	Musa acuminata	54.84	5.00e-133	466.00
IUUC-Nle-069151	Nomascus leucogenys	48.50	3.00e-143	500.00
IUUC-Opr-070277	Ochotona princeps	42.28	8.00e-108	382.00
IUUC-Oan-073562	Ornithorhynchus anatinus	48.98	1.00e-143	501.00
IUUC-Ocu-074280	Oryctolagus cuniculus	47.29	4.00e-135	473.00
IUUC-Obr-076718	Oryza brachyantha	69.19	4.00e-150	523.00
IUUC-Ogl-077302	Oryza glaberrima	59.20	0.00e+00	644.00
IUUC-Ogu-078718	Oryza glumaepatula	59.02	0.00e+00	642.00
IUUC-Oin-079515	Oryza indica	51.01	5.00e-121	427.00
IUUC-Olo-080427	Oryza longistaminata	54.20	2.00e-165	575.00
IUUC-Ome-081696	Oryza meridionalis	58.11	0.00e+00	625.00
IUUC-Oni-082137	Oryza nivara	59.02	0.00e+00	642.00
IUUC-Oru-085276	Oryza rufipogon	59.02	0.00e+00	642.00
IUUC-Osa-085791	Oryza sativa	59.02	0.00e+00	642.00
IUUC-Ola-087365	Oryzias latipes	47.83	2.00e-142	498.00
IUUC-Olu-087589	Ostreococcus lucimarinus	53.70	7.00e-157	545.00
IUUC-Oga-088357	Otolemur garnettii	46.29	3.00e-127	447.00
IUUC-Oar-089506	Ovis aries	50.39	6.00e-145	506.00
IUUC-Pan-091909	Papio anubis	48.41	3.00e-143	500.00
IUUC-Psi-093941	Pelodiscus sinensis	47.74	2.00e-135	474.00
IUUC-Ppa-095868	Physcomitrella patens	65.33	2.00e-137	481.00
IUUC-Pfo-096158	Poecilia formosa	48.02	9.00e-142	495.00
IUUC-Pab-098317	Pongo abelii	48.48	3.00e-143	501.00
IUUC-Pop-098989	Populus trichocarpa	68.72	2.00e-146	510.00
IUUC-Pca-100256	Procavia capensis	48.92	1.00e-134	472.00
IUUC-Ppe-101572	Prunus persica	59.67	1.00e-167	582.00
IUUC-Pva-102616	Pteropus vampyrus	48.64	1.00e-135	475.00
IUUC-Sce-106132	Saccharomyces cerevisiae	25.23	7.00e-43	167.00
IUUC-Sha-107326	Sarcophilus harrisii	50.00	4.00e-146	510.00
IUUC-Sja-107844	Schizosaccharomyces japonicus	25.52	3.00e-34	138.00
IUUC-Sit-110710	Setaria italica	65.74	1.00e-155	542.00
IUUC-Sly-111717	Solanum lycopersicum	86.50	0.00e+00	929.00
IUUC-Sbi-114420	Sorghum bicolor	57.14	0.00e+00	633.00
IUUC-Ssc-115646	Sus scrofa	48.61	5.00e-143	499.00
IUUC-Tgu-117009	Taeniopygia guttata	48.82	6.00e-135	473.00
IUUC-Tru-117862	Takifugu rubripes	48.95	7.00e-144	502.00
IUUC-Tsy-119424	Tarsius syrichta	40.19	9.00e-99	352.00
IUUC-Tca-121739	Theobroma cacao	62.00	6.00e-144	503.00
IUUC-Tae-125368	Triticum aestivum	57.65	7.00e-179	619.00
IUUC-Tur-126856	Triticum urartu	50.88	3.00e-96	344.00
IUUC-Tme-127126	Tuber melanosporum	34.23	2.00e-47	182.00
IUUC-Tbe-127665	Tupaia belangeri	41.12	2.00e-110	391.00
IUUC-Ttr-128826	Tursiops truncatus	48.88	6.00e-132	462.00
IUUC-Vpa-130768	Vicugna pacos	47.51	8.00e-134	469.00
IUUC-Vvi-131193	Vitis vinifera	65.76	8.00e-151	526.00
IUUC-Xtr-132842	Xenopus tropicalis	45.97	3.00e-128	451.00
IUUC-Xma-134020	Xiphophorus maculatus	48.02	9.00e-142	495.00
IUUC-Yli-134648	Yarrowia lipolytica	26.74	4.00e-39	155.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence