iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043475

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000846

Gene Name

GLYMA_13G069300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA13G04610	GLYMA13G04610.2	GLYMA13G04610.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.20e-17	65.3	56	126

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           +peeflCpIs  lM dPv+++sG++y+rss+e + + + +    ++++ + ++l+Pnl+l++ i +wc++ 
   Q: 56   PPEEFLCPISRSLMFDPVIVSSGHSYERSSVEACKNVNFTPQLPDGTTPDFSTLIPNLALKSAILKWCQST 126
           79********************************99999988889999999999**************986 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MEIQQSLKLT IHKKWPSSPK KPPKESEPIT PTPNTPKLKW KKIFFQTKTK TQIQTPPEEF 60
LCPISRSLMF DPVIVSSGHS YERSSVEACK NVNFTPQLPD GTTPDFSTLI PNLALKSAIL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTATATTCAC AGGCTAGTGT AGTGCTCAAT GTAGTCCTCA ACTTTCCCTT CAATCTCTTT 60
CCAATTGGGC AGATTTTCCA AAAGCAAAGG AACCAAACCT CTCTCTCTCT CTCTCTCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

gmx:100775869

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005518	Arabidopsis lyrata	51.68	4.00e-130	458.00
IUUC-Ath-006703	Arabidopsis thaliana	50.44	2.00e-134	472.00
IUUC-Bdi-014649	Brachypodium distachyon	40.65	1.00e-50	194.00
IUUC-Opu-084021	Oryza punctata	41.41	8.00e-40	158.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence