iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114233

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G250400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g030660	Sb03g030660.1	Sb03g030660.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.80e-07	31.0	468	509

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e++  +d++ +l+CgH +ha+C+++w       + + +CP+C+
   Q: 468  CIICQEEYqaRDCVGTLDCGHRYHAECVKQW------LMVKNLCPICK 509
           ********7744488899*************......999*******6 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAFRNMVCTP QVIDLTSERG QAQGGNGSEI PEQGAQHAVR VVGNGTNVGL SGVRSYYDVS 60
INHHHQPVHN PPPNLGVDSG FVFASNMYNP CMSSTSINRH VSHAQSFGSG NQTLPLNQVP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGTTCCTCC CCCCGATCCC CTTCCCCCCC CTCCACCCGC CGATCGCCCT CCGCTCGCTC 60
CACCGCGGCG GGCGATCGCT CATCTCCCTC TACCCTCCCT CCGGCGCGCG ATTCCCGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_03g030660

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000861	Aegilops tauschii	67.16	0.00e+00	694.00
IUUC-Atr-002953	Amborella trichopoda	48.28	1.00e-36	147.00
IUUC-Aly-005624	Arabidopsis lyrata	44.97	2.00e-34	139.00
IUUC-Ath-007411	Arabidopsis thaliana	31.08	1.00e-35	143.00
IUUC-Bdi-014154	Brachypodium distachyon	70.97	0.00e+00	738.00
IUUC-Bol-015568	Brassica oleracea	40.74	2.00e-35	142.00
IUUC-Bra-018007	Brassica rapa	42.11	2.00e-36	145.00
IUUC-Dme-032187	Drosophila melanogaster	26.92	2.00e-14	74.70
IUUC-Gma-043333	Glycine max	46.31	2.00e-37	149.00
IUUC-Hvu-047763	Hordeum vulgare	45.97	1.00e-106	379.00
IUUC-Lpe-051051	Leersia perrieri	68.29	0.00e+00	685.00
IUUC-Oba-075052	Oryza barthii	70.60	0.00e+00	715.00
IUUC-Obr-076274	Oryza brachyantha	68.86	0.00e+00	733.00
IUUC-Ogl-077324	Oryza glaberrima	70.97	0.00e+00	725.00
IUUC-Ogu-078173	Oryza glumaepatula	70.22	0.00e+00	712.00
IUUC-Oin-079682	Oryza indica	70.79	0.00e+00	726.00
IUUC-Olo-080723	Oryza longistaminata	47.25	4.00e-110	390.00
IUUC-Ome-081865	Oryza meridionalis	68.55	0.00e+00	683.00
IUUC-Oni-082807	Oryza nivara	70.04	0.00e+00	712.00
IUUC-Opu-083300	Oryza punctata	74.04	9.00e-180	622.00
IUUC-Oru-084217	Oryza rufipogon	70.97	0.00e+00	728.00
IUUC-Osa-086172	Oryza sativa	70.84	0.00e+00	724.00
IUUC-Pop-099935	Populus trichocarpa	30.97	5.00e-47	181.00
IUUC-Ppe-101426	Prunus persica	30.95	4.00e-41	161.00
IUUC-Sit-110729	Setaria italica	86.17	0.00e+00	782.00
IUUC-Sly-111252	Solanum lycopersicum	32.74	5.00e-46	177.00
IUUC-Stu-112453	Solanum tuberosum	31.79	1.00e-45	176.00
IUUC-Tca-121540	Theobroma cacao	32.98	5.00e-52	197.00
IUUC-Tae-125006	Triticum aestivum	63.36	0.00e+00	629.00
IUUC-Tur-126318	Triticum urartu	68.57	0.00e+00	700.00
IUUC-Vvi-131107	Vitis vinifera	32.80	2.00e-55	209.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence