iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121059

Ensembl Protein ID

EOY27428

UniProt Accession

A0A061GDE1; A0A061GDE1_THECC

Genbank Protein ID

EOY27428.1

Protein Name

RING/U-box superfamily protein

Genbank Nucleotide ID

CM001884

Gene Name

TCM_029275

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_029275	EOY27428	EOY27428

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	27.91	2.00e-16	84.00	IUUC-Hsa-046905

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MGTSSSDFDF AEEIYLSEVL DGSEGGDLQQ LDAKFAEQLQ FQDAIFFSVK ETGSSSTSRQ 60
MNIGATSSMR KPKARKSATK AGESSLSFCE ICSERKERRQ MFPISGCSHS FCSDCISMYV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAGGAGAAA GAAGATTAGG ACAGTAAGTA ATTGCTTGCA ACATGGGAAC AAGTTCATCT 60
GATTTTGATT TTGCAGAAGA GATTTACTTG TCAGAAGTCC TTGATGGAAG CGAAGGAGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR016150--Casein_kin_II_reg-sub_b-sht
IPR031127--E3_UB_ligase_RBR
IPR002867--IBR_dom
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF01485--IBR
PF00097--zf-C3HC4

SMART

SM00647--IBR

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000190	Aegilops tauschii	43.65	5.00e-44	170.00
IUUC-Atr-002709	Amborella trichopoda	40.67	9.00e-44	171.00
IUUC-Aca-004331	Anolis carolinensis	27.93	8.00e-14	70.50
IUUC-Aly-006445	Arabidopsis lyrata	34.93	9.00e-39	154.00
IUUC-Ath-007704	Arabidopsis thaliana	33.17	2.00e-25	109.00
IUUC-Bol-016072	Brassica oleracea	35.48	1.00e-37	150.00
IUUC-Bra-018037	Brassica rapa	34.10	2.00e-35	143.00
IUUC-Cja-019367	Callithrix jacchus	28.57	3.00e-17	81.60
IUUC-Csa-023174	Chlorocebus sabaeus	28.57	3.00e-17	81.30
IUUC-Cho-024298	Choloepus hoffmanni	28.78	2.00e-15	75.50
IUUC-Dre-028219	Danio rerio	25.94	8.00e-16	77.80
IUUC-Dno-029150	Dasypus novemcinctus	28.10	5.00e-17	80.50
IUUC-Dor-030669	Dipodomys ordii	30.37	9.00e-11	59.30
IUUC-Eca-034129	Equus caballus	28.23	8.00e-17	79.70
IUUC-Fca-036055	Felis catus	29.27	4.00e-16	77.80
IUUC-Fal-037155	Ficedula albicollis	27.27	3.00e-17	82.00
IUUC-Gmo-039328	Gadus morhua	27.55	2.00e-15	75.50
IUUC-Gga-041198	Gallus gallus	28.23	1.00e-17	83.60
IUUC-Hsa-046905	Homo sapiens	28.57	8.00e-18	84.30
IUUC-Hvu-047484	Hordeum vulgare	48.54	6.00e-58	217.00
IUUC-Itr-048769	Ictidomys tridecemlineatus	36.56	6.00e-13	65.90
IUUC-Lch-050168	Latimeria chalumnae	27.27	8.00e-15	73.60
IUUC-Lpe-051649	Leersia perrieri	45.93	4.00e-46	179.00
IUUC-Loc-052491	Lepisosteus oculatus	29.15	1.00e-18	87.40
IUUC-Mcc-054775	Macaca mulatta	28.57	8.00e-18	84.30
IUUC-Mtr-058155	Medicago truncatula	46.63	3.00e-50	191.00
IUUC-Mga-059820	Meleagris gallopavo	29.05	3.00e-17	81.60
IUUC-Mmr-061731	Microcebus murinus	28.10	1.00e-17	83.60
IUUC-Mdo-062999	Monodelphis domestica	28.23	5.00e-18	85.10
IUUC-Mmu-063659	Mus musculus	28.10	2.00e-17	82.80
IUUC-Mac-065414	Musa acuminata	48.02	3.00e-54	204.00
IUUC-Mpu-066110	Mustela putorius furo	28.23	8.00e-17	80.10
IUUC-Nle-069289	Nomascus leucogenys	28.57	3.00e-17	81.60
IUUC-Opr-070800	Ochotona princeps	33.04	1.00e-13	69.30
IUUC-Ont-072164	Oreochromis niloticus	29.56	3.00e-17	81.30
IUUC-Ocu-074266	Oryctolagus cuniculus	28.23	1.00e-16	79.70
IUUC-Ogu-078368	Oryza glumaepatula	42.80	8.00e-52	197.00
IUUC-Opu-083215	Oryza punctata	49.00	5.00e-58	217.00
IUUC-Ola-087213	Oryzias latipes	31.34	3.00e-16	78.20
IUUC-Oga-088033	Otolemur garnettii	28.10	5.00e-17	80.90
IUUC-Oar-089295	Ovis aries	28.10	5.00e-17	81.30
IUUC-Pan-091768	Papio anubis	28.57	3.00e-17	81.30
IUUC-Psi-093481	Pelodiscus sinensis	28.23	1.00e-17	82.80
IUUC-Ppa-095998	Physcomitrella patens	36.41	3.00e-36	145.00
IUUC-Pfo-096065	Poecilia formosa	29.36	2.00e-18	85.50
IUUC-Pop-099816	Populus trichocarpa	44.64	4.00e-57	214.00
IUUC-Ppe-101728	Prunus persica	35.84	2.00e-38	153.00
IUUC-Rno-105176	Rattus norvegicus	28.10	7.00e-17	80.90
IUUC-Ssl-108406	Sclerotinia sclerotiorum	27.09	2.00e-15	76.30
IUUC-Sly-111393	Solanum lycopersicum	31.27	8.00e-38	150.00
IUUC-Stu-112736	Solanum tuberosum	46.95	4.00e-73	267.00
IUUC-Sbi-114532	Sorghum bicolor	45.75	4.00e-54	204.00
IUUC-Tru-118499	Takifugu rubripes	31.53	2.00e-17	81.60
IUUC-Tni-119677	Tetraodon nigroviridis	31.19	4.00e-16	77.80
IUUC-Tae-124420	Triticum aestivum	47.12	2.00e-56	212.00
IUUC-Tur-126368	Triticum urartu	41.84	2.00e-50	192.00
IUUC-Vvi-130951	Vitis vinifera	52.23	8.00e-59	219.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence