iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014476

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000882

Gene Name

LOC100828210; BRADI_3g28200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G28200	BRADI3G28200.1	BRADI3G28200.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.00e-23	80.5	494	524

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd..tllvsGsdDgtikvW 28
           gH+  v+c+++ ++   +l+s+sdD+t+++W
   Q: 494  GHSMTVNCVSWnPTrpQMLASASDDCTVRIW 524
           79999*******555699************* PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MDLPESSVSH AAAQTEPTTR RLGARGLVDR EEFVRLIAQS LYSLGYRKTA ATLEAESGVP 60
LYPPEHDRLL FDVMSGRWDA CTAVIDSLAG ISDRNRAVAE FLVWRGHFLE LLGIGDDGVR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGATCCACAG ATAAACCAAA CCCCCGTCAG TTCTTGATGT GATCATTTCA GAATCAACAC 60
TTTCTCTTCC GAAATCGCCT ACACACCAAC AAAATCTCCT AATCTCGAGC TTTGCTTTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00667--LisH
SM00320--WD40

KEGG

bdi:100828210

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000995	Aegilops tauschii	79.92	0.00e+00	831.00
IUUC-Aly-005958	Arabidopsis lyrata	51.76	9.00e-137	479.00
IUUC-Ath-006873	Arabidopsis thaliana	51.18	1.00e-135	475.00
IUUC-Bol-015916	Brassica oleracea	49.41	2.00e-132	465.00
IUUC-Hvu-047777	Hordeum vulgare	87.24	0.00e+00	850.00
IUUC-Lpe-050773	Leersia perrieri	79.10	0.00e+00	845.00
IUUC-Mtr-058724	Medicago truncatula	52.76	2.00e-149	521.00
IUUC-Mac-065457	Musa acuminata	69.61	3.00e-125	441.00
IUUC-Oba-075135	Oryza barthii	80.04	0.00e+00	846.00
IUUC-Obr-076019	Oryza brachyantha	80.57	0.00e+00	858.00
IUUC-Ogu-078478	Oryza glumaepatula	79.85	0.00e+00	844.00
IUUC-Oin-079427	Oryza indica	79.66	0.00e+00	845.00
IUUC-Olo-080734	Oryza longistaminata	80.13	0.00e+00	758.00
IUUC-Ome-081855	Oryza meridionalis	79.38	0.00e+00	829.00
IUUC-Oni-082118	Oryza nivara	80.04	0.00e+00	846.00
IUUC-Opu-083225	Oryza punctata	80.95	0.00e+00	844.00
IUUC-Oru-084705	Oryza rufipogon	80.04	0.00e+00	846.00
IUUC-Pop-098968	Populus trichocarpa	57.93	6.00e-112	396.00
IUUC-Ppe-101881	Prunus persica	53.24	1.00e-148	519.00
IUUC-Sit-110082	Setaria italica	77.50	0.00e+00	778.00
IUUC-Stu-112587	Solanum tuberosum	49.09	7.00e-109	386.00
IUUC-Sbi-114431	Sorghum bicolor	76.69	0.00e+00	798.00
IUUC-Tae-124685	Triticum aestivum	88.18	0.00e+00	961.00
IUUC-Tur-126823	Triticum urartu	79.92	0.00e+00	843.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence