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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Cel-018610
Ensembl Protein ID F21H12.1
UniProt Accession Q09309; RBBP5_CAEEL
Genbank Protein ID CCD66115.1
Protein Name Retinoblastoma-binding protein homolog 5
Genbank Nucleotide ID FO080717
Gene Name rbbp-5; F21H12.1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
WBGene00017683 F21H12.1 F21H12.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNARAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAFdbPTMPhospho.ELM
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 3.30e-12 46.4 66 103
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H  +v+cl++  d + l+++s D++i ++D+  g+ll+
   Q: 66   HCLPVSCLSWsRDgRKLLTSSADNSIAMFDVLAGTLLH 103
           7779*******88899**************99888775 PP
   
Organism Caenorhabditis elegans
Functional Description
(View)

Functional Description


     Required for di- and trimethylation at 'Lys-4' of histone H3.
 Required for di- and trimethylation at 'Lys-4' of histone H3.
Protein Sequence
(Fasta)
MVEILDRTYG AQFPEELECH LDLQNASANC CKFNRWGSIV AVGCTDGRVL IYDFMTRNIA 60
RTFSAHCLPV SCLSWSRDGR KLLTSSADNS IAMFDVLAGT LLHRIRFNSM VTFAMFHPRN 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Cel-018610|E3,WD_repeat|Caenorhabditis elegans
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AAATGGTCGA AATACTCGAT CGAACATACG GGGCTCAATT TCCAGAAGAA CTTGAATGCC 60
ATCTTGACTT GCAGGTTTGT TAATTTTCCG AACTTACTGG AATACAGTTT AGGTTTTCAA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Cel-018610|E3,WD_repeat|Caenorhabditis elegans
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0853--WD repeat
Interpro

IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF12894--ANAPC4_WD40
SMART

SM00320--WD40
Gene Ontology

GO:0033588--C:Elongator holoenzyme complex
GO:0000123--C:histone acetyltransferase complex
GO:0044666--C:MLL3/4 complex
GO:0005634--C:nucleus
GO:0008023--C:transcription elongation factor complex
GO:0007281--P:germ cell development
GO:0044648--P:histone H3-K4 dimethylation
GO:0080182--P:histone H3-K4 trimethylation
GO:0018991--P:oviposition
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated
GO:0060290--P:transdifferentiation
KEGG cel:CELE_F21H12.1
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000616 Aegilops tauschii 30.83 6.00e-48 184.00
IUUC-Aml-002118 Ailuropoda melanoleuca 42.25 4.00e-81 294.00
IUUC-Atr-002777 Amborella trichopoda 29.84 2.00e-36 145.00
IUUC-Apl-004056 Anas platyrhynchos 42.25 4.00e-81 294.00
IUUC-Aca-004999 Anolis carolinensis 41.86 5.00e-81 293.00
IUUC-Aly-006092 Arabidopsis lyrata 30.89 3.00e-43 168.00
IUUC-Ath-006947 Arabidopsis thaliana 30.63 1.00e-43 169.00
IUUC-Ago-007753 Ashbya gossypii 28.45 6.00e-32 130.00
IUUC-Acl-008105 Aspergillus clavatus 29.86 9.00e-42 163.00
IUUC-Afl-008633 Aspergillus flavus 31.02 3.00e-41 161.00
IUUC-Afu-009075 Aspergillus fumigatus 26.74 3.00e-23 101.00
IUUC-Ani-009233 Aspergillus nidulans 30.80 9.00e-50 189.00
IUUC-Ang-009695 Aspergillus niger 30.26 2.00e-42 165.00
IUUC-Aor-009988 Aspergillus oryzae 31.02 3.00e-41 161.00
IUUC-Ate-010313 Aspergillus terreus 29.20 3.00e-41 161.00
IUUC-Ame-011134 Astyanax mexicanus 38.93 2.00e-67 248.00
IUUC-Bgr-012302 Blumeria graminis 31.12 6.00e-44 170.00
IUUC-Bta-012946 Bos taurus 42.13 2.00e-81 295.00
IUUC-Bci-013968 Botrytis cinerea 35.05 1.00e-50 192.00
IUUC-Bdi-014387 Brachypodium distachyon 32.06 7.00e-52 197.00
IUUC-Bra-017414 Brassica rapa 30.26 3.00e-45 174.00
IUUC-Cja-019938 Callithrix jacchus 42.25 6.00e-81 293.00
IUUC-Cfa-020726 Canis familiaris 42.19 4.00e-81 294.00
IUUC-Cpo-021560 Cavia porcellus 41.67 5.00e-67 246.00
IUUC-Cre-022588 Chlamydomonas reinhardtii 42.59 1.00e-20 92.80
IUUC-Csa-024192 Chlorocebus sabaeus 42.13 2.00e-81 295.00
IUUC-Cho-024355 Choloepus hoffmanni 42.13 4.00e-81 294.00
IUUC-Cin-025285 Ciona intestinalis 40.41 7.00e-77 280.00
IUUC-Csv-026366 Ciona savignyi 40.41 1.00e-76 278.00
IUUC-Cgl-026450 Colletotrichum gloeosporioides 28.08 4.00e-37 147.00
IUUC-Cne-027092 Cryptococcus neoformans 29.28 1.00e-38 152.00
IUUC-Cme-027137 Cyanidioschyzon merolae 26.96 3.00e-15 75.50
IUUC-Dre-027374 Danio rerio 42.36 2.00e-81 295.00
IUUC-Dno-030003 Dasypus novemcinctus 41.92 1.00e-78 285.00
IUUC-Dor-030355 Dipodomys ordii 42.13 4.00e-81 294.00
IUUC-Dse-031442 Dothistroma septosporum 31.20 2.00e-47 182.00
IUUC-Dme-031932 Drosophila melanogaster 40.98 1.00e-87 315.00
IUUC-Ete-032858 Echinops telfairi 41.35 1.00e-51 196.00
IUUC-Eca-034217 Equus caballus 42.13 2.00e-81 295.00
IUUC-Eeu-035024 Erinaceus europaeus 43.55 1.00e-77 282.00
IUUC-Fca-035370 Felis catus 42.25 4.00e-81 294.00
IUUC-Fal-036628 Ficedula albicollis 42.31 1.00e-78 285.00
IUUC-Fox-037739 Fusarium oxysporum 27.90 5.00e-42 164.00
IUUC-Fso-038094 Fusarium solani 28.99 2.00e-39 155.00
IUUC-Gmo-039088 Gadus morhua 41.31 2.00e-75 275.00
IUUC-Ggr-040063 Gaeumannomyces graminis 31.34 1.00e-46 179.00
IUUC-Gga-041160 Gallus gallus 42.13 2.00e-81 295.00
IUUC-Gac-041333 Gasterosteus aculeatus 41.63 2.00e-79 288.00
IUUC-Gma-043909 Glycine max 30.53 3.00e-45 174.00
IUUC-Ggo-044657 Gorilla gorilla 42.13 2.00e-81 295.00
IUUC-Hsa-045894 Homo sapiens 42.13 2.00e-81 295.00
IUUC-Hvu-047662 Hordeum vulgare 30.89 8.00e-47 180.00
IUUC-Itr-048125 Ictidomys tridecemlineatus 42.86 1.00e-78 286.00
IUUC-Kpa-049095 Komagataella pastoris 27.25 1.00e-35 142.00
IUUC-Lch-049495 Latimeria chalumnae 36.04 1.00e-49 189.00
IUUC-Lpe-051038 Leersia perrieri 30.03 2.00e-39 155.00
IUUC-Loc-052680 Lepisosteus oculatus 41.90 8.00e-81 293.00
IUUC-Laf-053717 Loxodonta africana 42.09 2.00e-81 295.00
IUUC-Mcc-055007 Macaca mulatta 42.86 1.00e-78 286.00
IUUC-Meu-056494 Macropus eugenii 47.43 4.00e-27 114.00
IUUC-Mor-057173 Magnaporthe oryzae 31.62 3.00e-48 184.00
IUUC-Mpo-057622 Magnaporthe poae 30.37 3.00e-46 177.00
IUUC-Mtr-058687 Medicago truncatula 30.53 3.00e-49 188.00
IUUC-Mla-059057 Melampsora laricipopulina 27.58 5.00e-35 140.00
IUUC-Mga-060037 Meleagris gallopavo 42.29 2.00e-80 291.00
IUUC-Mvi-060321 Microbotryum violaceum 28.97 3.00e-38 151.00
IUUC-Mmr-060755 Microcebus murinus 42.19 1.00e-79 289.00
IUUC-Mdo-061859 Monodelphis domestica 42.36 1.00e-81 295.00
IUUC-Mmu-063755 Mus musculus 42.13 2.00e-81 295.00
IUUC-Mac-065292 Musa acuminata 30.85 4.00e-46 179.00
IUUC-Mpu-065896 Mustela putorius furo 42.13 2.00e-81 294.00
IUUC-Mlu-067927 Myotis lucifugus 42.25 5.00e-81 293.00
IUUC-Nfi-068429 Neosartorya fischeri 29.66 7.00e-42 163.00
IUUC-Ncr-068738 Neurospora crassa 28.05 9.00e-42 163.00
IUUC-Nle-069608 Nomascus leucogenys 42.13 2.00e-81 295.00
IUUC-Opr-070319 Ochotona princeps 42.25 1.00e-80 292.00
IUUC-Ont-071451 Oreochromis niloticus 41.90 5.00e-80 290.00
IUUC-Oan-073445 Ornithorhynchus anatinus 42.79 7.00e-80 289.00
IUUC-Ocu-074341 Oryctolagus cuniculus 42.13 3.00e-81 294.00
IUUC-Oba-075664 Oryza barthii 30.65 5.00e-45 174.00
IUUC-Obr-076630 Oryza brachyantha 30.65 8.00e-44 170.00
IUUC-Ogl-077847 Oryza glaberrima 30.91 6.00e-45 174.00
IUUC-Ogu-077970 Oryza glumaepatula 30.25 2.00e-42 165.00
IUUC-Oin-079374 Oryza indica 30.91 5.00e-45 174.00
IUUC-Olo-080992 Oryza longistaminata 30.91 6.00e-45 174.00
IUUC-Ome-081683 Oryza meridionalis 30.29 8.00e-44 170.00
IUUC-Oni-082594 Oryza nivara 30.91 5.00e-45 174.00
IUUC-Opu-083907 Oryza punctata 30.91 6.00e-45 174.00
IUUC-Oru-084400 Oryza rufipogon 30.91 5.00e-45 174.00
IUUC-Osa-085442 Oryza sativa 30.91 5.00e-45 174.00
IUUC-Ola-086569 Oryzias latipes 41.34 1.00e-79 288.00
IUUC-Oga-088947 Otolemur garnettii 40.84 4.00e-74 270.00
IUUC-Oar-090358 Ovis aries 41.34 8.00e-81 293.00
IUUC-Ptr-091601 Pan troglodytes 42.13 3.00e-81 294.00
IUUC-Pan-092466 Papio anubis 42.13 2.00e-81 295.00
IUUC-Psi-093614 Pelodiscus sinensis 42.25 5.00e-81 293.00
IUUC-Pma-094450 Petromyzon marinus 43.07 2.00e-77 281.00
IUUC-Pno-094819 Phaeosphaeria nodorum 30.07 2.00e-40 158.00
IUUC-Ppa-095157 Physcomitrella patens 25.74 8.00e-16 76.30
IUUC-Pfo-096312 Poecilia formosa 41.90 7.00e-80 290.00
IUUC-Pab-098058 Pongo abelii 42.13 2.00e-81 295.00
IUUC-Pop-099039 Populus trichocarpa 31.40 1.00e-46 179.00
IUUC-Pca-100623 Procavia capensis 43.64 4.00e-77 280.00
IUUC-Ppe-102053 Prunus persica 31.14 6.00e-46 177.00
IUUC-Pva-102779 Pteropus vampyrus 42.52 6.00e-73 266.00
IUUC-Pgr-103398 Puccinia graminis 29.52 5.00e-35 140.00
IUUC-Ptt-103912 Puccinia triticina 29.20 9.00e-36 143.00
IUUC-Pte-104246 Pyrenophora teres 30.73 5.00e-42 164.00
IUUC-Pyt-104582 Pyrenophora triticirepentis 30.50 1.00e-41 162.00
IUUC-Rno-104838 Rattus norvegicus 42.13 2.00e-81 295.00
IUUC-Sce-106229 Saccharomyces cerevisiae 30.75 3.00e-36 144.00
IUUC-Sha-106527 Sarcophilus harrisii 42.36 1.00e-81 295.00
IUUC-Sja-107862 Schizosaccharomyces japonicus 34.39 1.00e-50 192.00
IUUC-Spo-108025 Schizosaccharomyces pombe 30.95 4.00e-44 170.00
IUUC-Ssl-108544 Sclerotinia sclerotiorum 34.79 2.00e-49 188.00
IUUC-Smo-109474 Selaginella moellendorffii 29.25 4.00e-34 137.00
IUUC-Sit-110687 Setaria italica 30.40 8.00e-45 173.00
IUUC-Sly-111597 Solanum lycopersicum 29.84 5.00e-41 160.00
IUUC-Stu-112389 Solanum tuberosum 29.32 2.00e-40 159.00
IUUC-Sar-113284 Sorex araneus 38.34 4.00e-59 221.00
IUUC-Sbi-114362 Sorghum bicolor 29.17 4.00e-43 168.00
IUUC-Sre-115146 Sporisorium reilianum 25.89 6.00e-29 120.00
IUUC-Ssc-115604 Sus scrofa 42.25 6.00e-81 293.00
IUUC-Tru-118258 Takifugu rubripes 41.67 2.00e-78 285.00
IUUC-Tsy-119169 Tarsius syrichta 42.86 2.00e-64 238.00
IUUC-Tni-119939 Tetraodon nigroviridis 41.57 1.00e-77 282.00
IUUC-Tca-121010 Theobroma cacao 31.13 9.00e-47 179.00
IUUC-Tre-121944 Trichoderma reesei 29.67 1.00e-40 159.00
IUUC-Tvi-122283 Trichoderma virens 29.38 2.00e-40 159.00
IUUC-Tur-126395 Triticum urartu 31.00 6.00e-48 184.00
IUUC-Tme-127150 Tuber melanosporum 31.25 4.00e-45 174.00
IUUC-Tbe-127745 Tupaia belangeri 36.88 1.00e-44 172.00
IUUC-Ttr-129187 Tursiops truncatus 43.64 5.00e-77 280.00
IUUC-Uma-129654 Ustilago maydis 27.23 1.00e-21 96.70
IUUC-Vda-129788 Verticillium dahliae 27.57 2.00e-44 171.00
IUUC-Vpa-130182 Vicugna pacos 41.50 1.00e-59 222.00
IUUC-Vvi-131557 Vitis vinifera 32.13 2.00e-45 175.00
IUUC-Xtr-132007 Xenopus tropicalis 41.90 3.00e-81 294.00
IUUC-Xma-133909 Xiphophorus maculatus 41.90 1.00e-79 288.00
IUUC-Yli-134524 Yarrowia lipolytica 29.94 6.00e-44 170.00
IUUC-Zma-134821 Zea mays 29.69 3.00e-45 174.00
Created Date 25-Jun-2017

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