iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017393

Ensembl Protein ID

Bra040678.1-P

UniProt Accession

M4FHU9; M4FHU9_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra040678	Bra040678.1	Bra040678.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.90e-27	93.8	326	356

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWD 29
           H ++ +c+++  +d +l+++Gs D+t++++D
   Q: 326  HDADLHCVDWnpHDdNLILTGSADNTVRLYD 356
           9999*******9445**************** PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MESDEAAAAS PQGSGGTVTP APKKRGRKPK IKEDSQTKEQ SGKESGGKKT KQSVDEKYTQ 60
WKGLVPILYD WLANHNLVWP SLSCRWGPQL DQATYKNRQR LYLSEQTDGS VPNTLVIANC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGAGCG ACGAAGCAGC AGCAGCGTCT CCTCAAGGGA GCGGAGGAAC CGTAACTCCG 60
GCGCCGAAGA AGAGAGGCCG GAAACCTAAG ATCAAGGAGG ATTCTCAGAC GAAGGAGCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000914	Aegilops tauschii	74.60	0.00e+00	646.00
IUUC-Bdi-014938	Brachypodium distachyon	77.17	0.00e+00	734.00
IUUC-Bol-016228	Brassica oleracea	97.60	0.00e+00	967.00
IUUC-Lpe-051595	Leersia perrieri	70.30	3.00e-180	624.00
IUUC-Oba-075959	Oryza barthii	68.70	2.00e-178	618.00
IUUC-Obr-076021	Oryza brachyantha	75.91	0.00e+00	708.00
IUUC-Ogl-077211	Oryza glaberrima	75.00	0.00e+00	697.00
IUUC-Ogu-078314	Oryza glumaepatula	64.44	3.00e-163	567.00
IUUC-Oin-079269	Oryza indica	76.50	0.00e+00	706.00
IUUC-Olo-080631	Oryza longistaminata	65.53	2.00e-177	614.00
IUUC-Oni-082416	Oryza nivara	70.65	0.00e+00	643.00
IUUC-Opu-083571	Oryza punctata	66.10	7.00e-168	583.00
IUUC-Oru-084902	Oryza rufipogon	70.22	0.00e+00	629.00
IUUC-Osa-085579	Oryza sativa	76.50	0.00e+00	706.00
IUUC-Ppa-095350	Physcomitrella patens	62.97	1.00e-177	615.00
IUUC-Ppe-101724	Prunus persica	85.27	0.00e+00	802.00
IUUC-Tae-125281	Triticum aestivum	75.05	0.00e+00	714.00
IUUC-Tur-126763	Triticum urartu	74.37	0.00e+00	640.00
IUUC-Vvi-131642	Vitis vinifera	80.00	0.00e+00	733.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence