iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099929

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

CM000346

Gene Name

POPTRDRAFT_281218; POPTR_0010s08150g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0010s08150	POPTR_0010s08150.1	POPTR_0010s08150.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.70e-06	27.9	393	432

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvf.hadClqkwpglknssskefrCPlCr 46
           C iCl+ + +g +  pCgH+  + +Cl+ +      + k++ CP+Cr
   Q: 393  CVICLDAPVEGAC-IPCGHMVgCMSCLKEI------KAKKWGCPVCR 432
           ********99899.9****999********......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGQQQSKDEL LYQQVNCSNI EGIKNLCREG ARLEWIDKEG KTPLIVACLN PQLFNVAKTL 60
IELGANVNAY RPGRNGGAPL HHAAKRGLEN TVKLLLSHGA NALMMNDDCQ TPLEVARAKG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTTTAGTTC CATTCAACTC CTCACCTATT TTTTAAATTT CCCATCAATT GACTTTCCAA 60
ATTCTTCTTT CTTAAGCAAA AAAAAAATAT CGAAATTCGA TTTTCCAGGA AAATTATAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0040--ANK repeat
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR002110--Ankyrin_rpt
IPR020683--Ankyrin_rpt-contain_dom
IPR001370--BIR_rpt
IPR001841--Znf_RING

PROSITE

PS50297--ANK_REP_REGION
PS50088--ANK_REPEAT
PS50089--ZF_RING_2

Pfam

PF00023--Ank
PF12796--Ank_2

SMART

SM00248--ANK
SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0000151--C:ubiquitin ligase complex
GO:0031625--F:ubiquitin protein ligase binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0010s08150g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006120	Arabidopsis lyrata	58.26	5.00e-155	540.00
IUUC-Ath-006665	Arabidopsis thaliana	57.42	2.00e-153	535.00
IUUC-Bol-016420	Brassica oleracea	55.93	4.00e-145	507.00
IUUC-Bra-017117	Brassica rapa	55.84	1.00e-145	509.00
IUUC-Gma-043107	Glycine max	61.61	3.00e-147	514.00
IUUC-Itr-048132	Ictidomys tridecemlineatus	36.36	7.00e-10	57.40
IUUC-Mtr-058502	Medicago truncatula	53.78	8.00e-100	356.00
IUUC-Ppe-101537	Prunus persica	60.72	6.00e-164	570.00
IUUC-Smo-109365	Selaginella moellendorffii	41.34	1.00e-85	309.00
IUUC-Sly-111568	Solanum lycopersicum	59.64	1.00e-157	549.00
IUUC-Stu-112345	Solanum tuberosum	59.64	1.00e-153	535.00
IUUC-Tca-121150	Theobroma cacao	59.45	1.00e-155	542.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence