iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058184

Ensembl Protein ID

KEH32065

UniProt Accession

A0A072V1R8; A0A072V1R8_MEDTR

Genbank Protein ID

KEH32065.1

Protein Name

Zinc finger, C3HC4 type (RING finger) protein

Genbank Nucleotide ID

CM001220

Gene Name

MTR_4g110100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_4g110100	KEH32065	KEH32065

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.00e-08	34.0	360	401

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C+++f   ++ +++lpC H +h dC+  w         + +CP+Cr
   Q: 360  CAVCKDEFavvEE-VKLLPCSHRYHGDCIMPW------LGIRNTCPVCR 401
           ********99666.******************......**********8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MADVTYLRRH HHHEPDDDQT LIPLPYWPST SDLDFDFDLY SSDPEFPSNH NHRFSRENFV 60
MDLFQQRVEQ SQITNHTDPI NQSLNDSVFD SLSFDLGFNH SDLHLDLNIA AEEDEDDFPD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTACGGTCA TTGAATTCTA CAAAAACAAT CAGGGGGCAT ATCCGTCATT CCACATCCCC 60
ACGCGTTATT GTCCAGAATC AGATCCTTCA TCCCAAACCA CACTTTCAAA CCACACTTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_4g110100

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002504	Amborella trichopoda	36.60	2.00e-36	146.00
IUUC-Aly-006572	Arabidopsis lyrata	31.34	7.00e-34	137.00
IUUC-Ath-006786	Arabidopsis thaliana	32.47	9.00e-37	147.00
IUUC-Bol-015556	Brassica oleracea	38.75	3.00e-31	128.00
IUUC-Bra-017981	Brassica rapa	40.00	3.00e-34	138.00
IUUC-Gma-043892	Glycine max	42.60	2.00e-64	238.00
IUUC-Mac-065058	Musa acuminata	38.26	1.00e-43	169.00
IUUC-Pop-099600	Populus trichocarpa	40.57	7.00e-55	206.00
IUUC-Ppe-101286	Prunus persica	42.03	2.00e-51	195.00
IUUC-Sly-111587	Solanum lycopersicum	36.38	1.00e-53	203.00
IUUC-Stu-112460	Solanum tuberosum	63.06	7.00e-43	167.00
IUUC-Tca-121330	Theobroma cacao	38.00	6.00e-56	211.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence