iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ptr-090974

Ensembl Protein ID

ENSPTRP00000010058.4

UniProt Accession

H2Q7M4; H2Q7M4_PANTR

Genbank Protein ID

ENSPTRP00000010058

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AACZ03093332

Gene Name

TDRD3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000005918.5	ENSPTRT00000010866.4	ENSPTRP00000010058.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.50e-08	34.5	195	232

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           de +l  ++eMGF++e+ +qaL +++nnleaA++ Ll+
   Q: 195  DEKALKHITEMGFSKEASRQALMDNGNNLEAALNVLLT 232
           78999*******************************97 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MLRLQMTDGH ISCTAVEFSY MSKISLNTPP GTKVKLSGIV DIKNGFLLLN DSNTTVLGGE 60
VEHLIEKWEL QRSLSKHNRS NIGTEGGPPP FVPFGQKCVS HVQVDSRELD RRKTLQVTMP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCCACCCTG CGCCCCAGCC GTCTACAGCG CGGGCGAAGG GCATCGGCAG GGAAGCGGCT 60
GTGGTTGCCG GATCTGGCAG TACAGAGCCA AGGTGGCAGG GCCGCGCTGG GACACGGATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR013894--RMI1_N
IPR002999--Tudor
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50304--TUDOR
PS50030--UBA

Pfam

PF08585--RMI1_N
PF00567--TUDOR
PF00627--UBA

SMART

SM00333--TUDOR
SM00165--UBA

Gene Ontology

GO:0035145--C:exon-exon junction complex
GO:0003682--F:chromatin binding
GO:0003723--F:RNA binding
GO:0003713--F:transcription coactivator activity

KEGG

ptr:452750

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000323	Aegilops tauschii	33.68	3.00e-12	65.90
IUUC-Aml-001751	Ailuropoda melanoleuca	91.27	0.00e+00	1151.00
IUUC-Atr-002788	Amborella trichopoda	34.74	1.00e-12	67.40
IUUC-Apl-004055	Anas platyrhynchos	74.89	0.00e+00	891.00
IUUC-Aca-004367	Anolis carolinensis	71.32	0.00e+00	867.00
IUUC-Aly-006072	Arabidopsis lyrata	36.27	2.00e-14	73.60
IUUC-Ath-007491	Arabidopsis thaliana	35.29	4.00e-14	72.40
IUUC-Ame-011439	Astyanax mexicanus	47.30	8.00e-124	437.00
IUUC-Bta-012894	Bos taurus	90.63	0.00e+00	1163.00
IUUC-Bdi-014462	Brachypodium distachyon	34.38	3.00e-13	69.30
IUUC-Bol-015343	Brassica oleracea	37.11	3.00e-14	72.80
IUUC-Bra-016787	Brassica rapa	36.45	2.00e-14	73.60
IUUC-Cel-018154	Caenorhabditis elegans	32.26	1.00e-17	84.70
IUUC-Cja-019364	Callithrix jacchus	94.78	0.00e+00	1194.00
IUUC-Cfa-021166	Canis familiaris	89.76	0.00e+00	1112.00
IUUC-Cpo-021678	Cavia porcellus	82.54	0.00e+00	959.00
IUUC-Csa-023299	Chlorocebus sabaeus	97.08	0.00e+00	1266.00
IUUC-Cho-024694	Choloepus hoffmanni	95.82	3.00e-140	491.00
IUUC-Cin-025191	Ciona intestinalis	39.72	3.00e-22	97.80
IUUC-Csv-026348	Ciona savignyi	52.94	2.00e-12	63.50
IUUC-Dre-028715	Danio rerio	44.95	3.00e-128	452.00
IUUC-Dno-030091	Dasypus novemcinctus	88.17	0.00e+00	1141.00
IUUC-Dor-030807	Dipodomys ordii	79.72	0.00e+00	979.00
IUUC-Dse-031459	Dothistroma septosporum	23.36	3.50e-02	33.50
IUUC-Dme-031770	Drosophila melanogaster	28.87	1.00e-20	95.10
IUUC-Ete-032507	Echinops telfairi	67.43	0.00e+00	684.00
IUUC-Eca-033406	Equus caballus	90.41	0.00e+00	1029.00
IUUC-Eeu-034600	Erinaceus europaeus	80.80	0.00e+00	961.00
IUUC-Fca-035916	Felis catus	91.09	0.00e+00	1147.00
IUUC-Fal-036658	Ficedula albicollis	73.20	0.00e+00	845.00
IUUC-Gmo-038974	Gadus morhua	53.75	5.00e-72	265.00
IUUC-Gga-040195	Gallus gallus	73.97	0.00e+00	905.00
IUUC-Gac-042537	Gasterosteus aculeatus	45.02	2.00e-127	449.00
IUUC-Gma-044234	Glycine max	43.43	1.00e-17	84.30
IUUC-Ggo-044715	Gorilla gorilla	98.01	0.00e+00	1287.00
IUUC-Hsa-045814	Homo sapiens	99.39	0.00e+00	1298.00
IUUC-Hvu-047365	Hordeum vulgare	34.38	2.00e-12	66.60
IUUC-Itr-047866	Ictidomys tridecemlineatus	90.17	0.00e+00	1145.00
IUUC-Lch-050393	Latimeria chalumnae	59.79	0.00e+00	672.00
IUUC-Lpe-050691	Leersia perrieri	34.38	7.00e-14	71.60
IUUC-Loc-052859	Lepisosteus oculatus	55.67	2.00e-164	572.00
IUUC-Laf-053953	Loxodonta africana	87.55	0.00e+00	853.00
IUUC-Mcc-055846	Macaca mulatta	96.77	0.00e+00	1263.00
IUUC-Meu-056790	Macropus eugenii	69.17	0.00e+00	855.00
IUUC-Mtr-058749	Medicago truncatula	41.76	7.00e-15	75.10
IUUC-Mla-058959	Melampsora laricipopulina	38.46	3.00e-06	45.80
IUUC-Mga-059656	Meleagris gallopavo	73.35	0.00e+00	841.00
IUUC-Mmr-061089	Microcebus murinus	90.62	0.00e+00	1098.00
IUUC-Mdo-063043	Monodelphis domestica	68.78	0.00e+00	745.00
IUUC-Mmu-063654	Mus musculus	84.02	0.00e+00	1022.00
IUUC-Mac-064947	Musa acuminata	40.82	2.00e-10	60.10
IUUC-Mpu-066115	Mustela putorius furo	90.86	0.00e+00	1048.00
IUUC-Mlu-066974	Myotis lucifugus	89.07	0.00e+00	1083.00
IUUC-Nle-069184	Nomascus leucogenys	98.00	0.00e+00	1275.00
IUUC-Opr-070770	Ochotona princeps	81.57	0.00e+00	1025.00
IUUC-Ont-072040	Oreochromis niloticus	58.47	1.00e-102	367.00
IUUC-Oan-073448	Ornithorhynchus anatinus	84.13	2.00e-69	254.00
IUUC-Ocu-074405	Oryctolagus cuniculus	92.47	0.00e+00	1159.00
IUUC-Oba-075977	Oryza barthii	34.38	5.00e-08	52.00
IUUC-Obr-076298	Oryza brachyantha	36.46	1.00e-13	70.90
IUUC-Ogl-077706	Oryza glaberrima	35.42	3.00e-08	52.80
IUUC-Ogu-078381	Oryza glumaepatula	34.38	2.00e-08	53.50
IUUC-Oin-080150	Oryza indica	35.42	3.00e-08	52.80
IUUC-Ome-081153	Oryza meridionalis	30.46	5.00e-08	52.00
IUUC-Oni-083115	Oryza nivara	34.38	7.00e-08	51.60
IUUC-Opu-083860	Oryza punctata	33.33	2.00e-12	66.60
IUUC-Oru-084859	Oryza rufipogon	35.42	4.00e-08	52.80
IUUC-Osa-085567	Oryza sativa	35.42	8.00e-07	48.10
IUUC-Ola-087049	Oryzias latipes	46.90	6.00e-133	468.00
IUUC-Oga-088455	Otolemur garnettii	91.24	0.00e+00	1163.00
IUUC-Oar-090096	Ovis aries	89.40	0.00e+00	1151.00
IUUC-Pan-092657	Papio anubis	96.77	0.00e+00	1263.00
IUUC-Psi-093113	Pelodiscus sinensis	75.80	0.00e+00	942.00
IUUC-Ppa-095466	Physcomitrella patens	41.30	1.00e-15	77.40
IUUC-Pfo-096631	Poecilia formosa	46.03	1.00e-131	463.00
IUUC-Pab-098070	Pongo abelii	98.77	0.00e+00	1288.00
IUUC-Pop-099235	Populus trichocarpa	37.50	4.00e-14	72.40
IUUC-Pca-101032	Procavia capensis	82.49	0.00e+00	1056.00
IUUC-Ppe-101793	Prunus persica	39.58	6.00e-16	78.60
IUUC-Pva-102290	Pteropus vampyrus	89.40	0.00e+00	1154.00
IUUC-Rno-105080	Rattus norvegicus	83.72	0.00e+00	992.00
IUUC-Sce-106191	Saccharomyces cerevisiae	40.00	3.00e-03	37.00
IUUC-Sha-107598	Sarcophilus harrisii	77.10	0.00e+00	971.00
IUUC-Sit-110735	Setaria italica	36.46	1.00e-13	70.90
IUUC-Sly-111126	Solanum lycopersicum	40.86	2.00e-14	73.20
IUUC-Stu-112780	Solanum tuberosum	40.00	1.00e-16	80.90
IUUC-Sar-113418	Sorex araneus	87.73	0.00e+00	1089.00
IUUC-Sbi-113925	Sorghum bicolor	36.46	3.00e-13	69.70
IUUC-Sre-114917	Sporisorium reilianum	37.80	9.00e-07	48.10
IUUC-Ssc-115712	Sus scrofa	91.26	0.00e+00	1171.00
IUUC-Tgu-117148	Taeniopygia guttata	73.70	0.00e+00	886.00
IUUC-Tru-117831	Takifugu rubripes	45.21	7.00e-129	454.00
IUUC-Tsy-118917	Tarsius syrichta	90.48	0.00e+00	1109.00
IUUC-Tni-120783	Tetraodon nigroviridis	56.06	2.00e-94	340.00
IUUC-Tca-121430	Theobroma cacao	45.31	1.00e-06	47.80
IUUC-Tae-123752	Triticum aestivum	33.68	3.00e-12	66.20
IUUC-Tur-126238	Triticum urartu	35.42	5.00e-12	65.50
IUUC-Ttr-128615	Tursiops truncatus	84.92	0.00e+00	1067.00
IUUC-Vpa-130531	Vicugna pacos	91.24	0.00e+00	1180.00
IUUC-Vvi-131607	Vitis vinifera	43.96	1.00e-13	70.90
IUUC-Xtr-132787	Xenopus tropicalis	57.51	0.00e+00	652.00
IUUC-Xma-133815	Xiphophorus maculatus	45.85	6.00e-131	461.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence