iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-096012

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545261

Gene Name

PHYPADRAFT_3694

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S374_36V6	PP1S374_36V6.1	PP1S374_36V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.80e-28	96.5	359	392

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcl.afsdtllvsGsdDgtikvWDlrtgv 34
           gHt+ v +l ++ d +l+s+s Dgtik+W + t  
   Q: 359  GHTNVVMDLlCW-DSFLLSCSLDGTIKIWAVNTAG 392
           89999999548*.67**************998765 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MAGMEVDDGP TKVGSKRNHS RSGNIAGAGG GGGLGGRGHV QQVCRYWQEG RCIKGDECQW 60
LHPGSAGSTG RWTSTGSGKR PNIVYDARDR EGRENREYNV GGWGYGGGGF SSGSNQGRPR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGGGA TGGAGGTTGA TGATGGGCCG ACGAAGGTGG GCAGTAAGAG AAATCACTCG 60
CGCTCGGGGA ACATTGCAGG CGCGGGAGGA GGAGGAGGAT TAGGAGGGCG AGGGCATGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0853--WD repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR000571--Znf_CCCH

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS50103--ZF_C3H1

Pfam

PF00400--WD40
PF00642--zf-CCCH

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40
SM00356--ZnF_C3H1

Gene Ontology

GO:0046872--F:metal ion binding

KEGG

ppp:PHYPADRAFT_3694

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000399	Aegilops tauschii	39.33	3.00e-58	218.00
IUUC-Aly-005699	Arabidopsis lyrata	53.45	7.00e-111	393.00
IUUC-Ath-007001	Arabidopsis thaliana	52.59	5.00e-110	390.00
IUUC-Bdi-014857	Brachypodium distachyon	54.49	7.00e-109	386.00
IUUC-Bol-016486	Brassica oleracea	52.51	8.00e-108	383.00
IUUC-Bra-017351	Brassica rapa	54.93	7.00e-109	386.00
IUUC-Gma-042894	Glycine max	55.02	3.00e-105	374.00
IUUC-Hvu-047824	Hordeum vulgare	55.60	2.00e-82	298.00
IUUC-Lpe-051596	Leersia perrieri	45.81	3.00e-84	304.00
IUUC-Mtr-058068	Medicago truncatula	54.71	2.00e-104	371.00
IUUC-Mac-065071	Musa acuminata	55.72	3.00e-109	388.00
IUUC-Oba-075769	Oryza barthii	46.81	3.00e-83	301.00
IUUC-Obr-076011	Oryza brachyantha	54.19	9.00e-109	386.00
IUUC-Ogl-077192	Oryza glaberrima	43.97	7.00e-60	223.00
IUUC-Ogu-078248	Oryza glumaepatula	47.01	4.00e-86	310.00
IUUC-Oin-079981	Oryza indica	55.09	1.00e-110	392.00
IUUC-Olo-080571	Oryza longistaminata	46.52	1.00e-78	286.00
IUUC-Ome-081598	Oryza meridionalis	46.71	7.00e-86	310.00
IUUC-Oni-082711	Oryza nivara	47.01	3.00e-86	311.00
IUUC-Opu-083451	Oryza punctata	51.69	6.00e-105	373.00
IUUC-Oru-085129	Oryza rufipogon	46.81	3.00e-83	301.00
IUUC-Osa-085619	Oryza sativa	55.17	2.00e-74	271.00
IUUC-Pop-099994	Populus trichocarpa	54.74	7.00e-108	383.00
IUUC-Ppe-101609	Prunus persica	54.71	3.00e-109	387.00
IUUC-Smo-108900	Selaginella moellendorffii	50.10	1.00e-120	425.00
IUUC-Sit-109731	Setaria italica	53.71	3.00e-108	384.00
IUUC-Sly-111514	Solanum lycopersicum	52.44	5.00e-100	357.00
IUUC-Stu-112646	Solanum tuberosum	52.74	4.00e-104	370.00
IUUC-Sbi-114748	Sorghum bicolor	53.71	5.00e-108	383.00
IUUC-Tca-121658	Theobroma cacao	52.63	3.00e-97	348.00
IUUC-Tae-125577	Triticum aestivum	55.09	7.00e-111	393.00
IUUC-Tur-126095	Triticum urartu	53.12	3.00e-57	216.00
IUUC-Vvi-131444	Vitis vinifera	47.35	2.00e-112	398.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence