iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tae-124459

Ensembl Protein ID

TRIAE_CS42_5AL_TGACv1_374855_AA1210260.1

UniProt Accession

A0A1D5YG99; A0A1D5YG99_WHEAT

Protein Name

tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; WD repeat-containing protein 4 homolog

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIAE_CS42_5AL_TGACv1_374855_AA1210260	TRIAE_CS42_5AL_TGACv1_374855_AA1210260.1	TRIAE_CS42_5AL_TGACv1_374855_AA1210260.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-14	55.1	200	238

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf....sd.tllvsGsdDgtikvWDlrtgv 34
           gHt+ v+++af     +  +l+sG++D t+++WD+  g 
   Q: 200  GHTEFVSSIAFtslsGGsSFLLSGGGDSTVRLWDYINGC 238
           89***********9622589**************86665 PP

Organism

Triticum aestivum

Functional Description
(View)

Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit.

Protein Sequence
(Fasta)

MEDAAVEEAE VSGAGEFAPA LVAAHPLGHS VAVAVGPELR VFDLNGGCAV SLSDDSGGCS 60
HSDAIRAISF SADGALFASA GDDKLVKIWK TDSWRCIQTI TSEKRVSAVA ISKDGLYVTF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCAGAAAAA GAAAAATAGA ACTCCTACTT GACACTGGCC ACCAGGTCCC GCGAAGAGCC 60
AGCCATAAAC CCTAGCAATT TCCCCACTCC CGAGCTCCCT CCCCGCCTCC CGCCCCTCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0819--tRNA processing
KW-0853--WD repeat

Interpro

IPR028884--Trm82
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0036265--P:RNA (guanine-N7)-methylation
GO:0030488--P:tRNA methylation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002431	Amborella trichopoda	53.60	8.00e-30	123.00
IUUC-Apl-003975	Anas platyrhynchos	29.71	2.00e-23	104.00
IUUC-Aca-005170	Anolis carolinensis	30.00	5.00e-19	89.40
IUUC-Aly-005769	Arabidopsis lyrata	52.07	6.00e-116	411.00
IUUC-Ath-006733	Arabidopsis thaliana	51.42	4.00e-112	398.00
IUUC-Bol-015373	Brassica oleracea	52.62	3.00e-104	373.00
IUUC-Bra-016644	Brassica rapa	53.57	5.00e-109	389.00
IUUC-Dre-028427	Danio rerio	33.45	1.00e-26	115.00
IUUC-Fal-037497	Ficedula albicollis	29.23	2.00e-22	100.00
IUUC-Gga-040547	Gallus gallus	29.18	8.00e-22	98.60
IUUC-Gac-041761	Gasterosteus aculeatus	28.57	7.00e-23	102.00
IUUC-Lch-050682	Latimeria chalumnae	31.00	2.00e-23	103.00
IUUC-Loc-052599	Lepisosteus oculatus	33.76	1.00e-28	121.00
IUUC-Laf-054390	Loxodonta africana	30.56	2.00e-24	107.00
IUUC-Mla-059135	Melampsora laricipopulina	28.63	2.00e-19	90.90
IUUC-Mac-065625	Musa acuminata	56.73	8.00e-127	447.00
IUUC-Ont-071555	Oreochromis niloticus	28.72	3.00e-20	93.20
IUUC-Ola-086716	Oryzias latipes	33.06	2.00e-23	103.00
IUUC-Pfo-096465	Poecilia formosa	28.43	8.00e-21	95.50
IUUC-Pop-098979	Populus trichocarpa	52.37	4.00e-117	415.00
IUUC-Ppe-101515	Prunus persica	56.78	4.00e-125	442.00
IUUC-Sit-110020	Setaria italica	80.83	0.00e+00	674.00
IUUC-Sly-111543	Solanum lycopersicum	52.87	2.00e-124	439.00
IUUC-Stu-111925	Solanum tuberosum	52.87	8.00e-124	437.00
IUUC-Tgu-117321	Taeniopygia guttata	28.99	2.00e-18	86.70
IUUC-Tru-118454	Takifugu rubripes	28.77	5.00e-24	105.00
IUUC-Tca-121746	Theobroma cacao	52.86	1.00e-120	427.00
IUUC-Tur-126254	Triticum urartu	94.59	0.00e+00	683.00
IUUC-Tbe-127683	Tupaia belangeri	53.95	2.00e-13	70.50
IUUC-Vvi-131428	Vitis vinifera	54.82	5.00e-130	457.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence