iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.8__2527__AT5G64920.1	fgenesh2_kg.8__2527__AT5G64920.1	fgenesh2_kg.8__2527__AT5G64920.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.30e-07	31.0	255	296

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C++ +   ++  + lpCgH++h dC+  w        ++ +CP+Cr
   Q: 255  CAVCKDGMvmgET-GKKLPCGHCYHGDCIMPW------LGTRNSCPVCR 296
           ******9988544.678***************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSDAPSSSPG ATASHWCYHC NKRVVVETLD DFVVCCECNK GFVESIQPIP AAYSSPAPPQ 60
PLSPDLTVED SSIGSHFLQM LRLLAHAPSQ RSPPRHLDVL SYEDDFFRLE LNSRTEIDEV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCCTCTTAAT CGGCTTATCG GATCCGAATA CGGACCCGAA AGCCCGATAA CCCGACGATA 60
TATAGCACGA TGTCCGATGC TCCGTCGTCT TCTCCGGGTG CCACGGCGTC GCACTGGTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0008270--F:zinc ion binding
GO:0016567--P:protein ubiquitination

KEGG

aly:ARALYDRAFT_496711

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007318	Arabidopsis thaliana	88.70	3.00e-129	453.00
IUUC-Bol-015980	Brassica oleracea	64.78	3.00e-75	274.00
IUUC-Bra-017830	Brassica rapa	69.18	2.00e-96	345.00
IUUC-Gma-042770	Glycine max	66.23	3.00e-50	191.00
IUUC-Mtr-058545	Medicago truncatula	62.75	6.00e-49	187.00
IUUC-Oba-075271	Oryza barthii	53.41	5.00e-21	94.00
IUUC-Ogl-077383	Oryza glaberrima	53.41	5.00e-21	94.00
IUUC-Ome-081587	Oryza meridionalis	57.14	1.00e-18	86.30
IUUC-Ppe-101680	Prunus persica	60.00	9.00e-45	173.00
IUUC-Sly-110882	Solanum lycopersicum	62.25	8.00e-46	177.00
IUUC-Stu-112141	Solanum tuberosum	62.25	3.00e-46	178.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence