iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-044267

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000845

Gene Name

LOC100793230; GLYMA_12G240800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA12G36960	GLYMA12G36960.3	GLYMA12G36960.3
GLYMA12G36960	GLYMA12G36960.1	GLYMA12G36960.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.60e-06	30.1	129	170

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCl++ +d p+++ CgH+f+  C++++   + + s++  CP+C+
   Q: 129  CNICLDRARD-PVLTCCGHLFCWPCFYQV---QIVYSNARECPVCK 170
           99********.999************666...778999*******7 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MELDLNQEPS DPTHASPDEF DSLLEELESA HEHVQDRIRR LEAITSRTRQ YSSWPLFHTP 60
IQITNSTGQT SALADAREEE MPSREVEERV VESGRGFKRK GAHLVAKALG RIETDANKEG 120

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Nucleotide Sequence
(Fasta)

TGCTCCTTCT TGTATTTAAC AAGGGGGAAA GAAGCAAAAC TGAAAGTGTA TTGCAAATTG 60
CAAAATCAAA ACTTTAGAGA ACCTAGCGAT TAGGTATGTC TTCTTCCCAT GTTTATTATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001370--BIR_rpt
IPR001841--Znf_RING

PROSITE

PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006481	Arabidopsis lyrata	41.95	6.00e-47	181.00
IUUC-Ath-006889	Arabidopsis thaliana	43.23	2.00e-46	179.00
IUUC-Bra-017862	Brassica rapa	42.17	5.00e-47	181.00
IUUC-Mtr-058658	Medicago truncatula	53.44	9.00e-103	367.00
IUUC-Pop-099746	Populus trichocarpa	39.47	1.00e-62	233.00
IUUC-Ppe-101798	Prunus persica	43.30	8.00e-70	257.00
IUUC-Stu-112210	Solanum tuberosum	48.15	2.00e-52	199.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence