iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099746

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_672684; POPTR_0001s23670g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s23670	POPTR_0001s23670.1	POPTR_0001s23670.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.60e-07	31.4	132	172

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C iCl++ +d p++++CgH+f+  C+   ++l+++ s+   CP+C
   Q: 132  CNICLDMAQD-PILTSCGHLFCWPCF---YQLSYVYSNVKECPVC 172
           99********.999************...4779999********* PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDLDLNQEPL YPSNDSLLGL ASIRDELENT HGHIEERLRQ LEAVTFRARQ RQRWRQSHFT 60
PQTVNVSVEP ATVNVRSDGG LLIGEASVAT EERRDEMNKF GKRKSTYLIA KALGRNGNGK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCCTTGAAC ATGCAAGTAA CCAAGCACCT GTCAATCAAT CCCTCAAACA ACTACCACCT 60
CTTGCTTTAA CTTTTATTGA TTGCTATAAA ATGATTTTAT GGATAAATCT TTGATCTTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001370--BIR_rpt
IPR001841--Znf_RING

PROSITE

PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0001s23670g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006481	Arabidopsis lyrata	44.05	2.00e-50	192.00
IUUC-Ath-006889	Arabidopsis thaliana	44.14	3.00e-50	191.00
IUUC-Bra-017862	Brassica rapa	44.76	2.00e-43	169.00
IUUC-Gma-044267	Glycine max	40.53	1.00e-45	176.00
IUUC-Mtr-058658	Medicago truncatula	44.39	7.00e-65	240.00
IUUC-Ppe-101798	Prunus persica	49.38	3.00e-84	305.00
IUUC-Sly-111287	Solanum lycopersicum	37.16	8.00e-40	156.00
IUUC-Stu-112210	Solanum tuberosum	43.21	7.00e-57	214.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence