iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017169

Ensembl Protein ID

Bra038415.1-P

UniProt Accession

M4FBE9; M4FBE9_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra038415	Bra038415.1	Bra038415.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.60e-06	29.5	254	312

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf........kdg.plvlpCgHvfhadClqkw.....pglknssskefrCPlCr 46
           C++Cle+         +    l++ C H+f+  C+ +w        +++ s+   CP+Cr
   Q: 254  CCVCLERVlskptpaeR-KfGLLTECDHAFCIGCIRNWrssspSTGMDVNSTLRACPICR 312
           9*****99876666542.1345699*************99998888888899999****8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MISIRAFNDN QIRTQVRRRI SVRWGIRLHN LLLCPSLEEE KNAELLRRLV ITGLNRFLGA 60
QFLGKPISGT VVPPRSPSIS PMSKRILCKF FAHGACLKGD NCEFSHDWKD PTNNVCTFYQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATATCCA TTAGGGCATT TAATGATAAT CAGATCCGAA CGCAAGTACG ACGTCGTATT 60
AGCGTACGGT GGGGGATTCG TCTACACAAT CTCCTCCTTT GTCCAAGCTT GGAAGAAGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR000571--Znf_CCCH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50103--ZF_C3H1
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4
PF00642--zf-CCCH

SMART

SM00184--RING
SM00356--ZnF_C3H1

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006128	Arabidopsis lyrata	76.18	6.00e-134	469.00
IUUC-Bol-015688	Brassica oleracea	96.45	5.00e-160	556.00
IUUC-Lch-049777	Latimeria chalumnae	31.75	4.00e-46	178.00
IUUC-Ocu-074869	Oryctolagus cuniculus	40.29	3.00e-28	119.00
IUUC-Ppe-101248	Prunus persica	72.05	4.00e-98	350.00
IUUC-Sit-110077	Setaria italica	51.21	1.00e-93	336.00
IUUC-Tca-121675	Theobroma cacao	60.21	5.00e-126	444.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence