iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099736

Ensembl Protein ID

POPTR_0010s23870.1

UniProt Accession

B9HUX2; B9HUX2_POPTR

Genbank Protein ID

EEF02587.2

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000346

Gene Name

POPTRDRAFT_567716; POPTR_0010s23870g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0010s23870	POPTR_0010s23870.1	POPTR_0010s23870.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-06	28.5	154	186

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           H++ v++++f  d  +l+s s Dg+ ++W   +g
   Q: 154  HNS-VRDMDFsLDsEFLASTSTDGSARIWKAEDG 186
           566.9******555***************97766 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MQGTVTCGSW IRRPENLNLV VLGKSSKKRE SASRSVLEIF SFDPQTASLS NSPQVTYVFE 60
ETEGEPVTIA VHPNGDDFVC STSKGGCKLL ELSGQETNLK LLAKELPPLQ DVGPQNCMAF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACGCTTCAAT TGTTTGTGCC TTGCAGAACT CCAAATATTG TCCAGTTTGA CCGGGTTTTC 60
CTCAGGTTTG TGACTTTGTT CTCCCAATAC AGGGGTCATG CAGGGAACTG TAACATGCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030176--C:integral component of endoplasmic reticulum membrane
GO:0005096--F:GTPase activator activity
GO:0051020--F:GTPase binding
GO:0005090--F:Sar guanyl-nucleotide exchange factor activity
GO:0009306--P:protein secretion
GO:0003400--P:regulation of COPII vesicle coating

KEGG

pop:POPTR_0010s23870g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002477	Amborella trichopoda	60.16	9.00e-133	465.00
IUUC-Gma-042654	Glycine max	73.45	2.00e-169	588.00
IUUC-Mtr-058623	Medicago truncatula	70.98	1.00e-167	582.00
IUUC-Ppa-095904	Physcomitrella patens	37.21	3.00e-60	225.00
IUUC-Ppe-101362	Prunus persica	74.36	1.00e-159	555.00
IUUC-Sly-110920	Solanum lycopersicum	66.84	3.00e-137	481.00
IUUC-Stu-112065	Solanum tuberosum	66.32	4.00e-137	480.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence