iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112065

Ensembl Protein ID

PGSC0003DMT400070284

UniProt Accession

M1CLX5; M1CLX5_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG404027324	PGSC0003DMT400070284	PGSC0003DMT400070284

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-08	36.2	157	187

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           ++++f  d  +l+s s Dg  ++W++r+gv+
   Q: 157  RDMDFsLDsEFLASTSTDGAARIWNTRDGVP 187
           6677885559*******************97 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MDGADVSVEG KVTCASWIKR PENTHLVVIG KSTGTCSSLE IFSFNSENTS LSSSPKATYV 60
LEEGGEPVRI AVHPSGDDFV CSTTTGCKLF DLYGHEDNIK FVCKEFPIQD VGPQKCMAFS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAACTCA CTTTTTTTTC CGCCATTGTT GTTACCTTGA GGTTTTTGGG TTTTGTGGAG 60
TTTTTGAAGA TTAAAAAAAT GGACGGTGCT GATGTATCTG TGGAAGGGAA AGTGACGTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR023302--Pept_S9A_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane

KEGG

sot:102586665

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000155	Aegilops tauschii	55.46	1.00e-103	368.00
IUUC-Atr-002477	Amborella trichopoda	59.20	4.00e-127	446.00
IUUC-Bdi-014908	Brachypodium distachyon	53.87	4.00e-104	370.00
IUUC-Cel-018480	Caenorhabditis elegans	26.00	1.00e-10	60.10
IUUC-Gma-042654	Glycine max	66.49	2.00e-142	497.00
IUUC-Mtr-058623	Medicago truncatula	64.05	6.00e-141	492.00
IUUC-Oba-075552	Oryza barthii	56.42	3.00e-117	413.00
IUUC-Ogl-077345	Oryza glaberrima	56.42	3.00e-117	413.00
IUUC-Ogu-078334	Oryza glumaepatula	56.42	3.00e-117	413.00
IUUC-Oin-079600	Oryza indica	56.15	8.00e-117	412.00
IUUC-Olo-080918	Oryza longistaminata	56.39	2.00e-117	414.00
IUUC-Ome-081986	Oryza meridionalis	56.15	5.00e-117	412.00
IUUC-Oni-082430	Oryza nivara	54.39	2.00e-94	337.00
IUUC-Opu-083902	Oryza punctata	54.05	1.00e-105	375.00
IUUC-Oru-084937	Oryza rufipogon	54.39	2.00e-94	337.00
IUUC-Osa-085881	Oryza sativa	56.15	8.00e-117	412.00
IUUC-Ppa-095590	Physcomitrella patens	41.34	8.00e-67	246.00
IUUC-Pop-099736	Populus trichocarpa	66.32	1.00e-143	501.00
IUUC-Ppe-101362	Prunus persica	65.90	2.00e-134	470.00
IUUC-Smo-108754	Selaginella moellendorffii	45.19	2.00e-61	228.00
IUUC-Sly-110920	Solanum lycopersicum	96.09	0.00e+00	711.00
IUUC-Tca-121608	Theobroma cacao	68.81	2.00e-150	523.00
IUUC-Tae-124657	Triticum aestivum	56.16	1.00e-106	378.00
IUUC-Tur-126597	Triticum urartu	59.93	1.00e-87	315.00
IUUC-Vvi-131686	Vitis vinifera	68.99	3.00e-132	463.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence