iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114707

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000768

Gene Name

SORBI_009G010400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb09g001100	Sb09g001100.1	Sb09g001100.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.90e-07	32.3	216	257

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C+e f     + + +pC H++hadC+  w         + +CP+Cr
   Q: 216  CAVCKEAFelgA-EAREMPCAHIYHADCILPW------LAIRNSCPVCR 257
           ******997743.4999***************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MATPSSPSPT HSPTSSSSSY WCYQCDRFVR ATAAPASPAC PSCGGGFLEE MGAPPPPRPA 60
YLRRHRAHNH HHHHHHHHHH IAAAAADLRP RRARRGASGS TDSRASPFNP VIVLRRSPPT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCCTCCACC CCACCCAAAG GGGAATCAGT CCTCCCACAC CACCAACCCT TCTTCTTCCT 60
CCCTCTTCCC CTCCGCCGCC ACCGCAACCA GCCTTTCCCA GTTCACCGCC GGGCGTCCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR010543--DUF1117
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF06547--DUF1117
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_09g001100

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003131	Amborella trichopoda	52.26	1.00e-68	252.00
IUUC-Aly-005531	Arabidopsis lyrata	44.86	4.00e-64	238.00
IUUC-Ath-007235	Arabidopsis thaliana	44.86	5.00e-65	241.00
IUUC-Bdi-014074	Brachypodium distachyon	70.10	1.00e-91	328.00
IUUC-Bol-016362	Brassica oleracea	47.47	7.00e-67	246.00
IUUC-Bra-017069	Brassica rapa	46.04	1.00e-61	229.00
IUUC-Gma-043110	Glycine max	50.80	4.00e-66	244.00
IUUC-Hvu-047236	Hordeum vulgare	75.29	1.00e-81	295.00
IUUC-Lpe-051386	Leersia perrieri	66.50	2.00e-106	378.00
IUUC-Mtr-057892	Medicago truncatula	51.31	3.00e-70	258.00
IUUC-Mac-065318	Musa acuminata	52.65	5.00e-78	283.00
IUUC-Oba-075840	Oryza barthii	75.10	3.00e-80	290.00
IUUC-Obr-076496	Oryza brachyantha	75.10	1.00e-80	291.00
IUUC-Ogl-077103	Oryza glaberrima	65.50	6.00e-106	376.00
IUUC-Ogu-078829	Oryza glumaepatula	75.10	3.00e-80	290.00
IUUC-Olo-080227	Oryza longistaminata	40.25	2.00e-51	195.00
IUUC-Ome-081205	Oryza meridionalis	65.50	3.00e-106	377.00
IUUC-Oni-082393	Oryza nivara	66.00	5.00e-104	370.00
IUUC-Opu-083490	Oryza punctata	71.43	2.00e-78	284.00
IUUC-Oru-084888	Oryza rufipogon	65.75	1.00e-103	369.00
IUUC-Osa-085474	Oryza sativa	73.08	3.00e-96	344.00
IUUC-Pop-100030	Populus trichocarpa	52.63	4.00e-70	257.00
IUUC-Ppe-101788	Prunus persica	55.84	2.00e-71	262.00
IUUC-Sly-110949	Solanum lycopersicum	50.30	8.00e-70	256.00
IUUC-Stu-112595	Solanum tuberosum	49.72	2.00e-69	254.00
IUUC-Tca-121148	Theobroma cacao	53.46	1.00e-72	265.00
IUUC-Tae-122757	Triticum aestivum	64.18	3.00e-102	364.00
IUUC-Vvi-131530	Vitis vinifera	50.57	3.00e-67	249.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence