iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112642

Ensembl Protein ID

PGSC0003DMT400015207

UniProt Accession

M1A5M8; M1A5M8_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG402005938	PGSC0003DMT400015207	PGSC0003DMT400015207
PGSC0003DMG402005938	PGSC0003DMT400015209	PGSC0003DMT400015209

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.10e-06	29.4	25	65

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C+iCle+f  +d+  v++C+H fh++C+  w       +++ +CP C
   Q: 25   CSICLEEFsdSDPSTVTGCKHEFHLQCILEW------CQRSSQCPMC 65
           ********77667889***************......********** PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MSEDILTSAA AFVEGGIQDA CDDACSICLE EFSDSDPSTV TGCKHEFHLQ CILEWCQRSS 60
QCPMCWQPLS LKDPNSQELL DAVEHERNIR MNPPRNTTIF HHPTLGDFEL QHLPVSATDS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAATGATACA TAATCAAAGG GAAAGTTCAA AGTCTTCCTC GCTTTTCCTT TCTGTGGTTG 60
CCTCTCAAAA AACCCAAATT CATCTGATCA GTTTTTTGTT TGATCCTCCC TATTAGTTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002655	Amborella trichopoda	58.74	5.00e-101	359.00
IUUC-Gma-043782	Glycine max	52.47	8.00e-95	339.00
IUUC-Mtr-058591	Medicago truncatula	60.78	2.00e-104	371.00
IUUC-Ppa-095686	Physcomitrella patens	55.97	2.00e-45	174.00
IUUC-Ppe-101489	Prunus persica	55.18	2.00e-99	354.00
IUUC-Smo-109592	Selaginella moellendorffii	78.57	3.00e-39	152.00
IUUC-Sit-110350	Setaria italica	54.27	9.00e-75	272.00
IUUC-Sbi-113905	Sorghum bicolor	47.91	3.00e-81	294.00
IUUC-Tca-121041	Theobroma cacao	63.00	1.00e-115	408.00
IUUC-Tur-126169	Triticum urartu	42.50	3.00e-67	247.00
IUUC-Vvi-131270	Vitis vinifera	53.24	4.00e-30	124.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence