iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131627

UUCD1 version

UUC-ViV-00400

Ensembl Protein ID

VIT_17s0000g08210.t01

UniProt Accession

F6GSR5; F6GSR5_VITVI

Genbank Protein ID

CCB42988.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN594950

Gene Name

SIS3; VIT_17s0000g08210

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_17s0000g08210	VIT_17s0000g08210.t01	VIT_17s0000g08210.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.30e-08	33.8	235	328

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf......................................................kdgplvlpCgHvfhadClqkwpglkn 34
           C+iCle+f                                                      ++ ++ lpC H fh +C+  w     
   Q: 235  CPICLEEFhvgnevlywlqphtnslmsgmlaerdaaakvmqvellkegklvtqgyvwfsenfRENVRGLPCAHNFHVECIDEW----- 317
           ****8888777666666666666666666665555555555555544444444444444444335999***************..... PP
   S: 35   ssskefrCPlCr 46
             + + +CP Cr
   Q: 318  -LRLNVKCPRCR 328
           .**********8 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MAIRGVDFKW YDGFFLSMLA TSVIIVAINW KRYDLCTYPL HIWIMVDYTT VFVFRLLMFV 60
DNGLAAGMGL DFGWQQRYAR FCGRIVVLSI LSLLLYPFLW AWTVIGTLWF TRARDCLPEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTCTCTCTA CTTTCTCTCC CTAACTCAAC TGTTACATTT CTCGCACTGT CACAATCGAG 60
ATTTTGTAAA AAAAAGATTC GCGGACGATT CGGTTCTCTG AATCAAGCAT TTGTTTCATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000667	Aegilops tauschii	71.70	5.00e-146	510.00
IUUC-Atr-002648	Amborella trichopoda	66.91	6.00e-153	532.00
IUUC-Aly-006490	Arabidopsis lyrata	66.27	1.00e-153	535.00
IUUC-Ath-007655	Arabidopsis thaliana	65.54	3.00e-153	533.00
IUUC-Bdi-014759	Brachypodium distachyon	68.26	1.00e-135	475.00
IUUC-Bol-015136	Brassica oleracea	66.42	1.00e-150	524.00
IUUC-Bra-018024	Brassica rapa	63.44	4.00e-141	493.00
IUUC-Gma-042879	Glycine max	75.30	1.00e-179	621.00
IUUC-Hvu-047589	Hordeum vulgare	85.71	3.00e-69	252.00
IUUC-Lpe-051403	Leersia perrieri	56.79	7.00e-101	359.00
IUUC-Mtr-058746	Medicago truncatula	75.54	2.00e-180	623.00
IUUC-Mac-064833	Musa acuminata	73.00	3.00e-161	560.00
IUUC-Oba-075099	Oryza barthii	70.24	3.00e-149	520.00
IUUC-Obr-076541	Oryza brachyantha	67.21	9.00e-151	525.00
IUUC-Ogl-077544	Oryza glaberrima	70.24	3.00e-149	520.00
IUUC-Ogu-078123	Oryza glumaepatula	65.85	2.00e-135	474.00
IUUC-Oin-079313	Oryza indica	72.40	8.00e-143	499.00
IUUC-Olo-080383	Oryza longistaminata	52.51	2.00e-92	331.00
IUUC-Ome-081106	Oryza meridionalis	62.04	4.00e-112	397.00
IUUC-Oni-082730	Oryza nivara	71.28	1.00e-152	531.00
IUUC-Opu-083224	Oryza punctata	70.22	5.00e-150	522.00
IUUC-Oru-085150	Oryza rufipogon	71.47	2.00e-123	434.00
IUUC-Osa-085392	Oryza sativa	73.12	4.00e-148	516.00
IUUC-Ppa-095217	Physcomitrella patens	43.67	3.00e-66	244.00
IUUC-Pop-099421	Populus trichocarpa	74.76	2.00e-165	574.00
IUUC-Ppe-101399	Prunus persica	70.26	3.00e-152	530.00
IUUC-Smo-109501	Selaginella moellendorffii	58.21	7.00e-109	385.00
IUUC-Sit-109685	Setaria italica	67.61	6.00e-151	526.00
IUUC-Sly-111730	Solanum lycopersicum	72.68	1.00e-172	598.00
IUUC-Stu-112358	Solanum tuberosum	70.05	8.00e-169	585.00
IUUC-Sbi-114646	Sorghum bicolor	67.38	2.00e-149	521.00
IUUC-Tca-121643	Theobroma cacao	78.06	0.00e+00	654.00
IUUC-Tae-124899	Triticum aestivum	70.51	1.00e-148	518.00
IUUC-Tur-126639	Triticum urartu	86.23	7.00e-125	440.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence