iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114772

UUCD1 version

UUC-SoB-00798

Ensembl Protein ID

Sb04g028200.1

UniProt Accession

A0A194YI73; A0A194YI73_SORBI

Genbank Protein ID

KXG19667.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G095600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g028200	Sb04g028200.1	Sb04g028200.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.80e-08	35.5	153	195

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f   ++ +++lp CgH+fh++C+  w         + +CPlCr
   Q: 153  CAVCLCEFdgeDR-LRLLPvCGHAFHLQCIDTW------LLSNSTCPLCR 195
           ********98444.*******************......888889****8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MVVAVASSQS SSTPLSPYSS SPSLRSFIRD APPYSTQTPP QVQTAGVGGG GGNGKISPAV 60
LFIIVILAVI FFISGLLHLL VRILMKKQHG RGAAMGESAP SPHRTGARDA AMDRQLQQLF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCGACCGCT CCCCACCCGG AAAACGAAGC CAAAAAAGCC ACGCTCTTGC CACCGCCGCC 60
GCTTCCGCTT CCGGGGCCAC CGTCCCTTCC CCTTGCGGCC TTGCCTCCCT CGCACGCCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000392	Aegilops tauschii	73.04	2.00e-71	261.00
IUUC-Atr-002701	Amborella trichopoda	46.33	3.00e-63	234.00
IUUC-Aly-005849	Arabidopsis lyrata	52.29	5.00e-77	280.00
IUUC-Ath-006995	Arabidopsis thaliana	51.85	2.00e-77	281.00
IUUC-Ago-007872	Ashbya gossypii	36.63	3.00e-12	63.20
IUUC-Bdi-014382	Brachypodium distachyon	69.69	4.00e-103	367.00
IUUC-Bol-015085	Brassica oleracea	51.75	1.00e-73	269.00
IUUC-Bra-017624	Brassica rapa	52.34	2.00e-73	268.00
IUUC-Cfa-020202	Canis familiaris	43.68	2.00e-15	76.60
IUUC-Gma-043709	Glycine max	53.42	7.00e-74	270.00
IUUC-Hvu-047144	Hordeum vulgare	70.57	4.00e-102	363.00
IUUC-Lpe-051339	Leersia perrieri	76.76	6.00e-126	443.00
IUUC-Mtr-057863	Medicago truncatula	49.47	6.00e-59	220.00
IUUC-Mvi-060468	Microbotryum violaceum	57.41	6.00e-12	65.50
IUUC-Mac-064867	Musa acuminata	49.64	1.00e-64	239.00
IUUC-Oba-075878	Oryza barthii	78.07	3.00e-128	450.00
IUUC-Obr-076120	Oryza brachyantha	79.36	3.00e-143	500.00
IUUC-Ogl-077906	Oryza glaberrima	77.81	9.00e-128	449.00
IUUC-Ogu-078031	Oryza glumaepatula	78.07	3.00e-128	450.00
IUUC-Olo-080996	Oryza longistaminata	78.07	3.00e-128	450.00
IUUC-Ome-081784	Oryza meridionalis	79.50	6.00e-127	446.00
IUUC-Oni-082697	Oryza nivara	78.07	3.00e-128	450.00
IUUC-Opu-083782	Oryza punctata	76.74	3.00e-129	453.00
IUUC-Oru-084352	Oryza rufipogon	78.07	3.00e-128	450.00
IUUC-Osa-085627	Oryza sativa	78.07	3.00e-128	450.00
IUUC-Ppa-095197	Physcomitrella patens	52.78	2.00e-32	133.00
IUUC-Pop-099808	Populus trichocarpa	52.65	3.00e-68	251.00
IUUC-Ppe-101995	Prunus persica	54.87	1.00e-65	242.00
IUUC-Sit-109828	Setaria italica	68.93	2.00e-107	381.00
IUUC-Sly-111152	Solanum lycopersicum	50.66	1.00e-59	223.00
IUUC-Stu-112810	Solanum tuberosum	49.85	2.00e-72	265.00
IUUC-Tsy-119421	Tarsius syrichta	36.56	1.00e-11	63.90
IUUC-Tca-121367	Theobroma cacao	54.83	7.00e-72	263.00
IUUC-Tae-125826	Triticum aestivum	71.53	9.00e-102	362.00
IUUC-Vvi-131093	Vitis vinifera	48.60	6.00e-62	230.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence