iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006175

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

GL348719

Gene Name

B80; ARALYDRAFT_914545

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_702287.1	scaffold_702287.1	scaffold_702287.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.40e-29	102.7	5	75

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpl.teedlvPnltlrrliqawcee 71
           +p +f+CpIsle+M+dPv+l+sG+t+dr sI++w++sg++tcP+t+ pl ++ +l+Pn++lr+li+++ + 
   Q: 5    LPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLsENPSLIPNHALRSLISNFAHV 75
           799**********************************************667799***********99875 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MAFDLPNDFR CPISLEIMSD PVILQSGHTF DRVSIQQWID SGNRTCPITK LPLSENPSLI 60
PNHALRSLIS NFAHVSPKES SRPRTQQEHS QSQSQALIST LVSRSPSNAS KLESLSRLVR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGAAAGAGCT AAAATTATAG ATGGCCTTTG ACTTACCAAA CGATTTCAGG TGCCCGATCT 60
CTCTTGAGAT TATGTCTGAC CCGGTTATCC TCCAATCGGG TCATACTTTC GATCGGGTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

aly:ARALYDRAFT_914545

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002776	Amborella trichopoda	47.12	9.00e-64	236.00
IUUC-Ath-006926	Arabidopsis thaliana	94.65	0.00e+00	647.00
IUUC-Bol-015331	Brassica oleracea	82.62	3.00e-153	533.00
IUUC-Bra-017717	Brassica rapa	85.29	3.00e-143	500.00
IUUC-Cne-026806	Cryptococcus neoformans	30.56	2.00e-05	42.70
IUUC-Gma-043375	Glycine max	59.46	3.00e-91	327.00
IUUC-Mtr-058590	Medicago truncatula	57.52	4.00e-103	367.00
IUUC-Ogl-077816	Oryza glaberrima	42.98	3.00e-27	115.00
IUUC-Oni-083095	Oryza nivara	42.98	2.00e-27	115.00
IUUC-Opu-084129	Oryza punctata	41.10	9.00e-31	127.00
IUUC-Pop-099846	Populus trichocarpa	61.15	2.00e-113	401.00
IUUC-Ppe-101638	Prunus persica	61.25	2.00e-120	424.00
IUUC-Sit-110168	Setaria italica	44.20	1.00e-42	166.00
IUUC-Sly-111598	Solanum lycopersicum	58.54	1.00e-96	345.00
IUUC-Stu-112509	Solanum tuberosum	57.61	4.00e-95	340.00
IUUC-Tca-121293	Theobroma cacao	66.94	2.00e-130	457.00
IUUC-Tae-124445	Triticum aestivum	43.53	4.00e-52	197.00
IUUC-Vvi-131324	Vitis vinifera	65.14	1.00e-119	422.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence