iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017717

Ensembl Protein ID

Bra013521.1-P

UniProt Accession

M4DAL1; M4DAL1_BRARP

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra013521	Bra013521.1	Bra013521.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.40e-29	103.0	5	75

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpl.teedlvPnltlrrliqawcee 71
           +p +f+CpIsle+M+dPv+++sG+t+dr sI+kw++sg++tcP+t+ pl +  +l+Pn++lr+li+++ + 
   Q: 5    LPNDFRCPISLEIMSDPVIIQSGHTFDRVSIQKWIDSGNRTCPITKLPLsETPSLIPNHALRSLISNFAHV 75
           799**********************************************445588***********99875 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MAFELPNDFR CPISLEIMSD PVIIQSGHTF DRVSIQKWID SGNRTCPITK LPLSETPSLI 60
PNHALRSLIS NFAHVSPKQQ HHSHSQSQSQ SQTHSLISTL VSRSSSHESR LESLTRLVRL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGTTCG AGCTCCCAAA CGATTTCAGG TGCCCGATCT CCCTCGAGAT TATGTCCGAC 60
CCGGTTATCA TCCAATCGGG TCACACTTTC GACCGCGTCT CCATCCAAAA GTGGATTGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000704	Aegilops tauschii	69.23	1.00e-25	108.00
IUUC-Atr-002776	Amborella trichopoda	47.43	1.00e-60	226.00
IUUC-Aly-006175	Arabidopsis lyrata	88.50	5.00e-170	590.00
IUUC-Ath-006926	Arabidopsis thaliana	87.97	5.00e-168	583.00
IUUC-Bol-015331	Brassica oleracea	91.96	5.00e-156	543.00
IUUC-Cne-026806	Cryptococcus neoformans	30.56	2.00e-05	42.70
IUUC-Gma-043375	Glycine max	60.81	4.00e-90	324.00
IUUC-Hvu-047263	Hordeum vulgare	43.60	1.00e-27	115.00
IUUC-Mtr-058590	Medicago truncatula	55.44	2.00e-100	358.00
IUUC-Mac-065427	Musa acuminata	72.73	5.00e-26	110.00
IUUC-Opu-084129	Oryza punctata	41.21	1.00e-32	133.00
IUUC-Pop-099846	Populus trichocarpa	61.29	5.00e-108	384.00
IUUC-Ppe-101638	Prunus persica	62.60	1.00e-121	428.00
IUUC-Sly-111598	Solanum lycopersicum	58.60	2.00e-93	335.00
IUUC-Stu-112509	Solanum tuberosum	59.78	8.00e-92	330.00
IUUC-Tca-121293	Theobroma cacao	66.67	9.00e-126	442.00
IUUC-Tae-124445	Triticum aestivum	43.65	4.00e-52	198.00
IUUC-Vvi-131324	Vitis vinifera	65.58	7.00e-116	410.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence