iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112509

Ensembl Protein ID

PGSC0003DMT400036036

UniProt Accession

M1B361; M1B361_SOLTU

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400013880	PGSC0003DMT400036036	PGSC0003DMT400036036

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.40e-29	103.2	7	75

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpl.teedlvPnltlrrliqawc 69
            p++f+CpIsle+M+dPv+l+sG+t+drssI++w++sg++tcP+t+ p+ ++ +l+Pn++lr+li+++ 
   Q: 7    FPDDFRCPISLEIMSDPVILSSGHTFDRSSIQRWVDSGHRTCPITNLPIsDPVSLIPNHALRSLISNYT 75
           69***********************************************8899************9985 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MATSTQFPDD FRCPISLEIM SDPVILSSGH TFDRSSIQRW VDSGHRTCPI TNLPISDPVS 60
LIPNHALRSL ISNYTLVSFP KPLAYPDPQS LIQTLIASSS SSNLDSKLNS LDQLSKLSKR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TATATATATT ATCTATAGAT AGATACGTAT AGAAAGAGAA TCTAGAGAGA GAAAACAGAA 60
ACCCATTTCC CAGAAGGAAC AAAAATAGAA ATGGCAACTT CAACCCAGTT CCCGGACGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002776	Amborella trichopoda	49.73	1.00e-72	265.00
IUUC-Aly-006175	Arabidopsis lyrata	59.73	2.00e-108	384.00
IUUC-Ath-006926	Arabidopsis thaliana	58.18	3.00e-107	380.00
IUUC-Bol-015331	Brassica oleracea	59.89	1.00e-93	335.00
IUUC-Bra-017717	Brassica rapa	58.42	8.00e-85	305.00
IUUC-Gma-043375	Glycine max	63.09	4.00e-97	346.00
IUUC-Lch-049807	Latimeria chalumnae	42.03	1.00e-08	52.40
IUUC-Mtr-058590	Medicago truncatula	58.92	5.00e-108	383.00
IUUC-Mvi-060511	Microbotryum violaceum	32.65	2.00e-04	38.90
IUUC-Pop-099846	Populus trichocarpa	62.47	9.00e-118	415.00
IUUC-Ppe-101638	Prunus persica	65.32	4.00e-125	439.00
IUUC-Sit-110168	Setaria italica	46.39	8.00e-50	189.00
IUUC-Sly-111598	Solanum lycopersicum	94.35	5.00e-180	622.00
IUUC-Tca-121293	Theobroma cacao	64.84	2.00e-125	440.00
IUUC-Tae-124445	Triticum aestivum	43.82	6.00e-54	203.00
IUUC-Vvi-131324	Vitis vinifera	71.04	1.00e-135	474.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence