iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.6__2449__AT5G24520.2	fgenesh2_kg.6__2449__AT5G24520.2	fgenesh2_kg.6__2449__AT5G24520.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-16	60.3	174	205

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclafsd.tllvsGsdDgtikvWDlrt 32
           H  +v+++a+ + + ++s s Dg+++++Dlr+
   Q: 174  HDKEVHDIAWGEaRVFASVSADGSVRIFDLRD 205
           8899******55689**************987 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MDNSAPDSLS RSETAVTYDS PYPLYAMAFS SLRSSPGHRI AVGSFLEDYN NRIDILSFDS 60
DSMTVKPHPN LSFEHPYPPT KLMFSPPSLR RPSAGDLLAS SGDFLRLWEI NEDSSTVEPI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTGATTCTT TCTCCGTCTC TGACTGACAC TGACCTCAAA ACTCTCCTCT CACTTTCGTC 60
GTGAAGAAGC CAAATCTCGA ATCGAATCAG AATCACTCAT TTCCATGGAT AACTCAGCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0045165--P:cell fate commitment
GO:0032880--P:regulation of protein localization
GO:0009733--P:response to auxin
GO:0009723--P:response to ethylene
GO:0010026--P:trichome differentiation

KEGG

aly:ARALYDRAFT_489315

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000420	Aegilops tauschii	63.64	8.00e-37	144.00
IUUC-Ath-006884	Arabidopsis thaliana	99.12	0.00e+00	694.00
IUUC-Acl-008299	Aspergillus clavatus	34.83	2.00e-46	179.00
IUUC-Afl-008470	Aspergillus flavus	34.17	2.00e-42	166.00
IUUC-Afu-008896	Aspergillus fumigatus	35.92	2.00e-43	169.00
IUUC-Ani-009375	Aspergillus nidulans	35.32	8.00e-44	171.00
IUUC-Ang-009687	Aspergillus niger	34.79	5.00e-49	187.00
IUUC-Aor-010198	Aspergillus oryzae	33.75	5.00e-42	165.00
IUUC-Ate-010363	Aspergillus terreus	40.53	8.00e-39	154.00
IUUC-Bgr-012055	Blumeria graminis	35.85	3.00e-47	182.00
IUUC-Bci-013840	Botrytis cinerea	36.50	1.00e-50	193.00
IUUC-Bdi-014944	Brachypodium distachyon	63.29	2.00e-122	431.00
IUUC-Bol-015620	Brassica oleracea	91.79	6.00e-177	612.00
IUUC-Bra-017045	Brassica rapa	92.38	2.00e-177	613.00
IUUC-Cgl-026588	Colletotrichum gloeosporioides	36.71	4.00e-50	191.00
IUUC-Cne-026871	Cryptococcus neoformans	32.53	1.00e-48	186.00
IUUC-Cme-027345	Cyanidioschyzon merolae	37.27	2.00e-54	205.00
IUUC-Dse-031207	Dothistroma septosporum	37.16	3.00e-41	162.00
IUUC-Fox-037852	Fusarium oxysporum	37.53	3.00e-51	195.00
IUUC-Fso-038173	Fusarium solani	36.43	3.00e-51	195.00
IUUC-Ggr-040072	Gaeumannomyces graminis	36.75	8.00e-49	187.00
IUUC-Gma-043012	Glycine max	76.25	6.00e-156	542.00
IUUC-Hvu-047639	Hordeum vulgare	62.94	7.00e-118	416.00
IUUC-Kpa-049347	Komagataella pastoris	31.65	1.00e-45	176.00
IUUC-Lpe-051336	Leersia perrieri	64.01	4.00e-121	427.00
IUUC-Lma-053005	Leptosphaeria maculans	39.88	4.00e-45	176.00
IUUC-Meu-056685	Macropus eugenii	46.15	4.00e-69	254.00
IUUC-Mor-057075	Magnaporthe oryzae	36.16	9.00e-44	170.00
IUUC-Mpo-057336	Magnaporthe poae	37.03	6.00e-48	184.00
IUUC-Mtr-058793	Medicago truncatula	78.84	2.00e-161	560.00
IUUC-Mvi-060379	Microbotryum violaceum	37.72	4.00e-42	165.00
IUUC-Mac-065344	Musa acuminata	60.48	3.00e-111	394.00
IUUC-Nfi-068302	Neosartorya fischeri	35.14	2.00e-43	169.00
IUUC-Ncr-068642	Neurospora crassa	36.96	1.00e-48	187.00
IUUC-Oba-075455	Oryza barthii	61.13	8.00e-112	395.00
IUUC-Obr-076064	Oryza brachyantha	64.04	1.00e-114	406.00
IUUC-Ogl-077224	Oryza glaberrima	61.13	8.00e-112	395.00
IUUC-Ogu-078639	Oryza glumaepatula	60.83	5.00e-111	393.00
IUUC-Oin-080194	Oryza indica	61.13	9.00e-112	395.00
IUUC-Olo-080234	Oryza longistaminata	60.83	4.00e-111	394.00
IUUC-Oni-082021	Oryza nivara	61.13	9.00e-112	395.00
IUUC-Opu-083903	Oryza punctata	60.18	1.00e-111	395.00
IUUC-Oru-084738	Oryza rufipogon	61.13	8.00e-112	395.00
IUUC-Osa-085445	Oryza sativa	61.13	8.00e-112	395.00
IUUC-Pno-094967	Phaeosphaeria nodorum	39.60	3.00e-45	176.00
IUUC-Pop-099260	Populus trichocarpa	81.34	8.00e-167	578.00
IUUC-Ppe-101664	Prunus persica	80.81	2.00e-166	577.00
IUUC-Pte-104094	Pyrenophora teres	40.18	2.00e-45	176.00
IUUC-Pyt-104726	Pyrenophora triticirepentis	40.76	3.00e-45	176.00
IUUC-Sce-106252	Saccharomyces cerevisiae	31.84	2.00e-43	169.00
IUUC-Sja-107768	Schizosaccharomyces japonicus	38.34	2.00e-49	189.00
IUUC-Spo-108014	Schizosaccharomyces pombe	36.68	3.00e-48	184.00
IUUC-Ssl-108466	Sclerotinia sclerotiorum	36.50	2.00e-50	192.00
IUUC-Sly-111838	Solanum lycopersicum	77.33	2.00e-161	561.00
IUUC-Stu-112456	Solanum tuberosum	77.33	5.00e-161	559.00
IUUC-Sar-113705	Sorex araneus	45.09	3.00e-69	254.00
IUUC-Sbi-113984	Sorghum bicolor	64.21	5.00e-102	363.00
IUUC-Sre-114968	Sporisorium reilianum	37.97	6.00e-54	204.00
IUUC-Tca-121493	Theobroma cacao	80.00	6.00e-159	552.00
IUUC-Tre-121987	Trichoderma reesei	37.17	4.00e-52	197.00
IUUC-Tvi-122586	Trichoderma virens	37.41	3.00e-52	198.00
IUUC-Tae-125936	Triticum aestivum	63.24	3.00e-118	417.00
IUUC-Tme-126973	Tuber melanosporum	39.11	9.00e-44	171.00
IUUC-Uma-129362	Ustilago maydis	39.04	2.00e-54	206.00
IUUC-Vda-130025	Verticillium dahliae	38.48	2.00e-48	186.00
IUUC-Vvi-131483	Vitis vinifera	76.25	1.00e-157	548.00
IUUC-Yli-134419	Yarrowia lipolytica	38.73	4.00e-59	221.00
IUUC-Zma-135276	Zea mays	63.13	2.00e-118	418.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence