iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ame-010884

Ensembl Protein ID

ENSAMXP00000007662.1

UniProt Accession

W5KJA0; W5KJA0_ASTMX

Genbank Protein ID

ENSAMXP00000007662

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

APWO01075169

Gene Name

RACK1 (1 of many)

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMXG00000007457.1	ENSAMXT00000007662.1	ENSAMXP00000007662.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-44	148.8	146	181
UBD/Beta-Prp	8.20e-55	186.3	10	264

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf....sdtllvsGsdDgtikvWDlrt 32
           gH+++v+c++f    s++++vs+++D+ +kvW+l  
   Q: 146  GHSEWVSCVRFspnsSNPIIVSCGWDKMVKVWNLAN 181
           8***********98544****************865 PP

UBD/Beta-Prp

   S: 4    tlkghhksvitcvkf.spdksllatgsrdgtikvwdvttgkl.....lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkc 86
           tlkgh   v + ++   ++ ++++++srd+ti  w++t+  +      r l gh+ +v++v +s+dg++ ++gs D+t+++wdl tg++
   Q: 10   TLKGHSGWVTQ-IATtPQFPDMILSASRDKTIVMWKLTRDETnygvpQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTT 97
           56666665555.555489999******************999*********************************************** PP
   S: 87   vhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg..nllvsGslDrtvrlWdlktgkllr 173
           ++ + gh+++vls++fs+++  +vsGs+d+ti++w++    ++   ++gh+++v+cv+++p++   ++vs++ D++v++W+l++ kl +
   Q: 98   TRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLGVCKYTIQDEGHSEWVSCVRFSPNSsnPIIVSCGWDKMVKVWNLANCKLKT 186
           ***********************************7765555544899*************998569***************7777776 PP
   S: 174  tltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsg 254
              g ht+  + ++++++g  ++sg++dg+  lwdl +g+ ++tl g  d+++ + fs  + + ++++  +si+iWdl+ +
   Q: 187  NHIG-HTGFLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DTINALCFS-PNRYWLCAATGPSIKIWDLEGK 264
           6676.****************************************997.568889999.7788889999********9865 PP

Organism

Astyanax mexicanus

Protein Sequence
(Fasta)

MTEQMTLRGT LKGHSGWVTQ IATTPQFPDM ILSASRDKTI VMWKLTRDET NYGVPQRALR 60
GHSHFVSDVV ISSDGQFALS GSWDGTLRLW DLTTGTTTRR FVGHTKDVLS VAFSADNRQI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAATACT ACAACTCCCA CAATGCAACA GCGCGAACTC TGGTGGTAAG CTTTGCTTCC 60
GGTGGTTTGG CGGTCCTTTT CCTGTGCCTA AACCGTGGAG TAGCTAGGCT GCTGAAGCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001935	Ailuropoda melanoleuca	96.53	0.00e+00	640.00
IUUC-Apl-003918	Anas platyrhynchos	96.44	9.00e-164	568.00
IUUC-Aca-004869	Anolis carolinensis	96.53	0.00e+00	640.00
IUUC-Aly-005671	Arabidopsis lyrata	64.81	1.00e-124	439.00
IUUC-Ath-007105	Arabidopsis thaliana	65.63	6.00e-125	440.00
IUUC-Ago-007720	Ashbya gossypii	55.91	2.00e-102	365.00
IUUC-Acl-008156	Aspergillus clavatus	72.12	3.00e-138	484.00
IUUC-Afl-008684	Aspergillus flavus	71.15	4.00e-137	480.00
IUUC-Afu-008867	Aspergillus fumigatus	73.08	1.00e-139	489.00
IUUC-Ani-009221	Aspergillus nidulans	72.12	2.00e-138	484.00
IUUC-Ang-009843	Aspergillus niger	71.15	1.00e-136	478.00
IUUC-Aor-010193	Aspergillus oryzae	71.15	4.00e-137	480.00
IUUC-Ate-010420	Aspergillus terreus	72.44	4.00e-125	440.00
IUUC-Bgr-012064	Blumeria graminis	70.51	9.00e-136	476.00
IUUC-Bta-013357	Bos taurus	96.53	0.00e+00	640.00
IUUC-Bci-013862	Botrytis cinerea	71.47	2.00e-138	484.00
IUUC-Bol-016231	Brassica oleracea	65.94	1.00e-126	446.00
IUUC-Bra-016879	Brassica rapa	65.53	3.00e-125	441.00
IUUC-Cja-019914	Callithrix jacchus	96.53	0.00e+00	640.00
IUUC-Cfa-020755	Canis familiaris	96.53	0.00e+00	640.00
IUUC-Cpo-022377	Cavia porcellus	96.53	0.00e+00	642.00
IUUC-Cre-022909	Chlamydomonas reinhardtii	75.87	2.00e-138	485.00
IUUC-Csa-023025	Chlorocebus sabaeus	96.53	0.00e+00	640.00
IUUC-Cin-025647	Ciona intestinalis	78.03	2.00e-147	514.00
IUUC-Csv-026027	Ciona savignyi	77.71	2.00e-145	508.00
IUUC-Cgl-026718	Colletotrichum gloeosporioides	74.91	9.00e-130	456.00
IUUC-Cne-026930	Cryptococcus neoformans	70.83	2.00e-136	478.00
IUUC-Dno-029470	Dasypus novemcinctus	81.70	7.00e-146	509.00
IUUC-Dor-031098	Dipodomys ordii	87.07	3.00e-146	511.00
IUUC-Dse-031255	Dothistroma septosporum	72.44	8.00e-139	486.00
IUUC-Dme-032118	Drosophila melanogaster	77.46	5.00e-148	516.00
IUUC-Eeu-034771	Erinaceus europaeus	91.48	3.00e-173	600.00
IUUC-Fca-036315	Felis catus	96.53	0.00e+00	640.00
IUUC-Fox-037702	Fusarium oxysporum	72.12	2.00e-139	488.00
IUUC-Fso-038384	Fusarium solani	72.76	1.00e-139	489.00
IUUC-Ggr-039985	Gaeumannomyces graminis	72.44	1.00e-139	489.00
IUUC-Gga-040540	Gallus gallus	96.53	0.00e+00	640.00
IUUC-Gac-041316	Gasterosteus aculeatus	93.57	2.00e-177	614.00
IUUC-Gma-042872	Glycine max	65.53	1.00e-124	439.00
IUUC-Ggo-045253	Gorilla gorilla	96.53	0.00e+00	640.00
IUUC-Hsa-046809	Homo sapiens	96.53	0.00e+00	640.00
IUUC-Itr-048025	Ictidomys tridecemlineatus	96.53	0.00e+00	640.00
IUUC-Kpa-049214	Komagataella pastoris	58.06	2.00e-100	358.00
IUUC-Lch-049634	Latimeria chalumnae	94.01	0.00e+00	627.00
IUUC-Loc-052163	Lepisosteus oculatus	97.48	0.00e+00	644.00
IUUC-Lma-053113	Leptosphaeria maculans	73.08	3.00e-140	491.00
IUUC-Laf-054422	Loxodonta africana	96.53	0.00e+00	640.00
IUUC-Mcc-055348	Macaca mulatta	96.53	0.00e+00	640.00
IUUC-Meu-056543	Macropus eugenii	96.53	0.00e+00	642.00
IUUC-Mor-057107	Magnaporthe oryzae	72.44	2.00e-140	491.00
IUUC-Mpo-057487	Magnaporthe poae	72.76	3.00e-140	490.00
IUUC-Mtr-058808	Medicago truncatula	65.84	5.00e-125	440.00
IUUC-Mla-058909	Melampsora laricipopulina	72.52	8.00e-139	486.00
IUUC-Mga-059387	Meleagris gallopavo	96.53	0.00e+00	640.00
IUUC-Mvi-060392	Microbotryum violaceum	69.23	1.00e-134	472.00
IUUC-Mdo-062932	Monodelphis domestica	96.53	0.00e+00	640.00
IUUC-Mmu-064132	Mus musculus	96.53	0.00e+00	640.00
IUUC-Mpu-066721	Mustela putorius furo	95.58	0.00e+00	629.00
IUUC-Mlu-068221	Myotis lucifugus	95.90	3.00e-173	600.00
IUUC-Nfi-068344	Neosartorya fischeri	73.08	1.00e-139	489.00
IUUC-Ncr-068722	Neurospora crassa	71.15	1.00e-137	481.00
IUUC-Nle-069865	Nomascus leucogenys	96.53	0.00e+00	640.00
IUUC-Opr-071100	Ochotona princeps	82.33	5.00e-149	520.00
IUUC-Oan-072788	Ornithorhynchus anatinus	96.53	0.00e+00	640.00
IUUC-Ocu-073844	Oryctolagus cuniculus	94.01	1.00e-178	618.00
IUUC-Obr-076099	Oryza brachyantha	61.16	4.00e-112	397.00
IUUC-Oga-088811	Otolemur garnettii	96.53	0.00e+00	640.00
IUUC-Oar-089962	Ovis aries	96.53	0.00e+00	640.00
IUUC-Ptr-091340	Pan troglodytes	96.53	0.00e+00	640.00
IUUC-Pan-091946	Papio anubis	96.53	0.00e+00	640.00
IUUC-Pma-094535	Petromyzon marinus	94.32	0.00e+00	629.00
IUUC-Pno-095100	Phaeosphaeria nodorum	75.47	8.00e-98	349.00
IUUC-Ppa-095752	Physcomitrella patens	76.04	2.00e-140	491.00
IUUC-Pfo-097311	Poecilia formosa	95.58	0.00e+00	637.00
IUUC-Pab-097863	Pongo abelii	96.53	0.00e+00	641.00
IUUC-Pop-099345	Populus trichocarpa	67.49	6.00e-128	450.00
IUUC-Pca-100594	Procavia capensis	95.58	0.00e+00	635.00
IUUC-Ppe-101743	Prunus persica	65.12	2.00e-123	434.00
IUUC-Pva-102746	Pteropus vampyrus	81.39	2.00e-147	514.00
IUUC-Pgr-103375	Puccinia graminis	54.95	1.00e-95	342.00
IUUC-Ptt-103839	Puccinia triticina	72.52	2.00e-137	481.00
IUUC-Pte-104026	Pyrenophora teres	73.08	3.00e-140	491.00
IUUC-Pyt-104584	Pyrenophora triticirepentis	73.08	3.00e-140	491.00
IUUC-Rno-104964	Rattus norvegicus	96.53	0.00e+00	640.00
IUUC-Sce-106224	Saccharomyces cerevisiae	54.78	2.00e-98	351.00
IUUC-Sha-107409	Sarcophilus harrisii	96.53	0.00e+00	640.00
IUUC-Sja-107971	Schizosaccharomyces japonicus	66.77	1.00e-127	449.00
IUUC-Spo-108297	Schizosaccharomyces pombe	65.18	2.00e-124	438.00
IUUC-Ssl-108479	Sclerotinia sclerotiorum	71.47	2.00e-138	484.00
IUUC-Sit-110060	Setaria italica	64.00	2.00e-116	412.00
IUUC-Sar-113173	Sorex araneus	96.53	0.00e+00	640.00
IUUC-Sre-115107	Sporisorium reilianum	70.83	1.00e-139	488.00
IUUC-Ssc-116218	Sus scrofa	92.11	7.00e-177	612.00
IUUC-Tru-118202	Takifugu rubripes	93.38	2.00e-180	624.00
IUUC-Tni-120260	Tetraodon nigroviridis	93.06	9.00e-180	622.00
IUUC-Tca-120951	Theobroma cacao	66.15	2.00e-126	445.00
IUUC-Tre-121961	Trichoderma reesei	73.08	9.00e-141	492.00
IUUC-Tvi-122447	Trichoderma virens	72.76	1.00e-139	489.00
IUUC-Tme-127105	Tuber melanosporum	69.58	1.00e-127	448.00
IUUC-Tbe-128021	Tupaia belangeri	77.23	7.00e-85	305.00
IUUC-Ttr-128637	Tursiops truncatus	85.17	7.00e-159	552.00
IUUC-Uma-129634	Ustilago maydis	71.79	2.00e-140	491.00
IUUC-Vda-129923	Verticillium dahliae	72.12	6.00e-139	486.00
IUUC-Vvi-131115	Vitis vinifera	65.74	3.00e-126	444.00
IUUC-Xtr-132105	Xenopus tropicalis	95.58	0.00e+00	637.00
IUUC-Yli-134624	Yarrowia lipolytica	60.76	2.00e-119	421.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence