iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121499

Ensembl Protein ID

EOX90864

UniProt Accession

A0A061DFB2; A0A061DFB2_THECC

Genbank Protein ID

EOX90864.1

Protein Name

Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

CM001879

Gene Name

TCM_000214

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_000214	EOX90864	EOX90864

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-15	56.9	476	513

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllks 38
           ++++++++f  ++++lv++s D +i+++D+++ ++lk+
   Q: 476  SGRISSMDFhrTSNYLVTASEDESIRLYDVSSATCLKT 513
           5789******644*********************9985 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MEREEGGVIV VGRAEIDTRA PFRSVKEAVM LFGEKVLVGE IYASKIKEMK ALAGANGQSQ 60
SKLAALTTEL EETKQSLQKA REEGNLMSYR IKTLREELEL TKKELQQLKA REFDQKQRFD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CATATTTATA TTTATTTATA AAATTATTAA TATTCAGTCT AAAAACAACA TGATGATAAC 60
TCGGAAATTT TATCTATAAT AATTCAGAAT TAGCGGCAAA TTCTGGTCCA CTAATGGCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000390	Aegilops tauschii	68.73	2.00e-145	507.00
IUUC-Atr-002607	Amborella trichopoda	74.26	5.00e-158	549.00
IUUC-Apl-003817	Anas platyrhynchos	43.48	4.00e-65	241.00
IUUC-Aly-005462	Arabidopsis lyrata	79.06	7.00e-163	565.00
IUUC-Ath-006609	Arabidopsis thaliana	78.47	7.00e-162	561.00
IUUC-Ame-010661	Astyanax mexicanus	41.10	2.00e-64	239.00
IUUC-Bdi-014222	Brachypodium distachyon	68.73	4.00e-144	503.00
IUUC-Bol-015485	Brassica oleracea	75.80	2.00e-158	550.00
IUUC-Bra-016914	Brassica rapa	75.58	7.00e-158	548.00
IUUC-Cgl-026516	Colletotrichum gloeosporioides	31.95	8.00e-39	153.00
IUUC-Cne-026890	Cryptococcus neoformans	29.46	4.00e-29	121.00
IUUC-Eca-033879	Equus caballus	41.35	7.00e-57	214.00
IUUC-Eeu-035229	Erinaceus europaeus	35.87	1.00e-46	179.00
IUUC-Fal-036843	Ficedula albicollis	43.48	5.00e-65	241.00
IUUC-Gmo-038506	Gadus morhua	41.30	1.00e-63	236.00
IUUC-Gac-042494	Gasterosteus aculeatus	42.81	2.00e-62	232.00
IUUC-Gma-042835	Glycine max	84.30	2.00e-177	613.00
IUUC-Ggo-045204	Gorilla gorilla	42.75	4.00e-64	238.00
IUUC-Hvu-047690	Hordeum vulgare	67.64	1.00e-144	504.00
IUUC-Lch-050431	Latimeria chalumnae	43.48	5.00e-65	241.00
IUUC-Lpe-050812	Leersia perrieri	67.27	3.00e-137	480.00
IUUC-Laf-054265	Loxodonta africana	46.00	6.00e-51	193.00
IUUC-Mtr-058607	Medicago truncatula	80.23	5.00e-169	585.00
IUUC-Mvi-060411	Microbotryum violaceum	33.70	4.00e-53	201.00
IUUC-Mac-064497	Musa acuminata	73.75	1.00e-153	534.00
IUUC-Ont-071988	Oreochromis niloticus	42.40	1.00e-65	243.00
IUUC-Oba-075229	Oryza barthii	67.55	1.00e-139	488.00
IUUC-Obr-076490	Oryza brachyantha	68.88	2.00e-139	487.00
IUUC-Ogl-077381	Oryza glaberrima	68.07	4.00e-137	479.00
IUUC-Ogu-078068	Oryza glumaepatula	68.28	1.00e-138	484.00
IUUC-Oin-079415	Oryza indica	67.85	1.00e-139	488.00
IUUC-Olo-080773	Oryza longistaminata	59.21	1.00e-114	405.00
IUUC-Ome-081277	Oryza meridionalis	56.42	3.00e-105	374.00
IUUC-Oni-082990	Oryza nivara	67.85	6.00e-140	489.00
IUUC-Opu-083374	Oryza punctata	67.98	1.00e-138	484.00
IUUC-Oru-084354	Oryza rufipogon	67.85	9.00e-140	489.00
IUUC-Osa-086154	Oryza sativa	68.28	2.00e-138	484.00
IUUC-Ola-087095	Oryzias latipes	39.38	7.00e-68	249.00
IUUC-Psi-092972	Pelodiscus sinensis	42.96	1.00e-63	236.00
IUUC-Pfo-096775	Poecilia formosa	42.76	7.00e-66	244.00
IUUC-Pop-099278	Populus trichocarpa	84.16	3.00e-165	573.00
IUUC-Ppe-101860	Prunus persica	84.94	4.00e-174	602.00
IUUC-Sit-110657	Setaria italica	69.28	2.00e-141	494.00
IUUC-Sly-110867	Solanum lycopersicum	83.97	4.00e-173	599.00
IUUC-Sbi-114094	Sorghum bicolor	69.58	1.00e-141	494.00
IUUC-Tgu-116465	Taeniopygia guttata	46.61	2.00e-56	213.00
IUUC-Tsy-119314	Tarsius syrichta	32.73	2.00e-31	128.00
IUUC-Tae-124779	Triticum aestivum	68.73	2.00e-145	507.00
IUUC-Tur-126512	Triticum urartu	72.08	2.00e-127	447.00
IUUC-Vvi-131040	Vitis vinifera	69.13	0.00e+00	719.00
IUUC-Xtr-132660	Xenopus tropicalis	39.14	1.00e-65	243.00
IUUC-Yli-134509	Yarrowia lipolytica	32.59	2.00e-44	171.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence