iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-130942

UUCD1 version

UUC-ViV-00017

Ensembl Protein ID

VIT_00s0916g00010.t01

UniProt Accession

A5B310; A5B310_VITVI

Genbank Protein ID

CAN63097.1; CCB50187.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

AM444844; FN595574

Gene Name

VIT_00s0916g00010; VITISV_013326

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_00s0916g00010	VIT_00s0916g00010.t01	VIT_00s0916g00010.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.40e-08	33.6	30	77
E3 activity/RING/U-box	1.30e-06	29.0	26	88

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw...pglknssskefrCPlCr 46
           C iC+++ +d p+v+ CgH+++  C++kw   +  +  s  + +CP+C+
   Q: 30   CNICFDSARD-PVVTLCGHLYCWPCVYKWfhvQSASLASDEHPQCPVCK 77
           99********.999***************99766666678888*****7 PP

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggk........tcPvtrqplteedlvPn 58
           + f C I ++  rdPvv+ +G+ y   ++ kw+  +          +cPv+++++++++lvP 
   Q: 26   DSFECNICFDSARDPVVTLCGHLYCWPCVYKWFHVQSAslasdehpQCPVCKAEISHTTLVPL 88
           78*******************************5554455566667***************96 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MAIEQYFAHD WRSVSAAATE AENLNDSFEC NICFDSARDP VVTLCGHLYC WPCVYKWFHV 60
QSASLASDEH PQCPVCKAEI SHTTLVPLYG RGQTPSETEL EGKTHCFGMA IPPRPPACGT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTTAAGAAT TGGTTGGCTT GAAGAAATTG TGAGACAGAT CCATGGCCAT CGAGCAATAC 60
TTCGCCCATG ACTGGAGATC TGTATCTGCT GCAGCAACTG AAGCTGAAAA TCTTAATGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:0016021--C:integral component of membrane
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

vvi:100265502

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-044047	Glycine max	62.72	4.00e-79	286.00
IUUC-Kpa-049242	Komagataella pastoris	33.77	9.00e-09	52.40
IUUC-Mtr-057847	Medicago truncatula	51.29	1.00e-59	221.00
IUUC-Pop-099091	Populus trichocarpa	64.04	1.00e-84	304.00
IUUC-Ppe-101989	Prunus persica	71.30	2.00e-93	334.00
IUUC-Sly-111102	Solanum lycopersicum	54.82	7.00e-66	242.00
IUUC-Stu-112310	Solanum tuberosum	58.33	3.00e-71	260.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence