iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lma-053157

Ensembl Protein ID

CBX92108

UniProt Accession

E5R5D8; E5R5D8_LEPMJ

Genbank Protein ID

CBX92108.1

Protein Name

Eukaryotic translation initiation factor 3 subunit F

Genbank Nucleotide ID

FP929083

Gene Name

LEMA_P048140.1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LEMA_P048140.1	CBX92108	CBX92108

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	34.26	1.00e-41	168.00	IUUC-Hsa-046860

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Leptosphaeria maculans

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MAENDSFLHL ARPLGPAPVG TQPSTAPLNV AIQPQAVFSI LDHSLRRPAD QERVIGTLLG 60
TRSEDGTEIE IRNCYAVPHT ETAEQVEVDM DYQKQMLALH LRANPREVLV GWYATSSDLN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGAGA ACGACTCTTT CCTGCACCTT GCGCGCCCCC TTGGTCCCGC GCCCGTTGGC 60
ACCCAGCCCT CGACTGCCCC GCTGAACGTG GCCATCCAGC CCCAGGTATG CGACCCTGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome

Interpro

IPR027531--eIF3f
IPR000555--JAMM/MPN+_dom
IPR024969--Rpn11/EIF3F_C

Pfam

PF01398--JAB
PF13012--MitMem_reg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0005829--C:cytosol
GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0071540--C:eukaryotic translation initiation factor 3 complex, eIF3e
GO:0071541--C:eukaryotic translation initiation factor 3 complex, eIF3m
GO:0005634--C:nucleus
GO:0003743--F:translation initiation factor activity
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001150	Aegilops tauschii	32.51	1.00e-37	149.00
IUUC-Aml-001527	Ailuropoda melanoleuca	34.80	5.00e-43	166.00
IUUC-Atr-002686	Amborella trichopoda	36.40	6.00e-37	145.00
IUUC-Apl-003977	Anas platyrhynchos	33.33	9.00e-37	144.00
IUUC-Aca-004335	Anolis carolinensis	33.46	1.00e-43	168.00
IUUC-Aly-005945	Arabidopsis lyrata	35.40	3.00e-39	153.00
IUUC-Ath-007045	Arabidopsis thaliana	34.31	3.00e-38	150.00
IUUC-Acl-008365	Aspergillus clavatus	78.50	1.00e-145	507.00
IUUC-Afl-008742	Aspergillus flavus	78.32	3.00e-141	493.00
IUUC-Afu-009030	Aspergillus fumigatus	79.48	9.00e-148	514.00
IUUC-Ani-009212	Aspergillus nidulans	79.29	1.00e-148	517.00
IUUC-Ang-009712	Aspergillus niger	78.50	7.00e-145	504.00
IUUC-Aor-009885	Aspergillus oryzae	78.32	3.00e-146	509.00
IUUC-Ate-010315	Aspergillus terreus	77.85	6.00e-139	484.00
IUUC-Ame-010801	Astyanax mexicanus	28.12	2.00e-23	100.00
IUUC-Bgr-011982	Blumeria graminis	67.74	9.00e-128	447.00
IUUC-Bta-012804	Bos taurus	34.72	2.00e-43	167.00
IUUC-Bci-013891	Botrytis cinerea	73.31	1.00e-131	460.00
IUUC-Bdi-014328	Brachypodium distachyon	31.91	2.00e-34	137.00
IUUC-Bol-015446	Brassica oleracea	35.00	7.00e-41	159.00
IUUC-Bra-016862	Brassica rapa	35.00	7.00e-41	159.00
IUUC-Cel-018171	Caenorhabditis elegans	26.37	3.00e-28	117.00
IUUC-Cja-019335	Callithrix jacchus	34.80	5.00e-43	166.00
IUUC-Cfa-020138	Canis familiaris	34.80	4.00e-43	166.00
IUUC-Cpo-022109	Cavia porcellus	34.29	3.00e-37	147.00
IUUC-Cre-022664	Chlamydomonas reinhardtii	34.26	8.00e-45	172.00
IUUC-Csa-023994	Chlorocebus sabaeus	34.80	4.00e-43	166.00
IUUC-Cho-024351	Choloepus hoffmanni	27.11	6.00e-21	93.20
IUUC-Cin-025801	Ciona intestinalis	35.61	2.00e-47	180.00
IUUC-Csv-025805	Ciona savignyi	34.17	4.00e-44	169.00
IUUC-Cgl-026643	Colletotrichum gloeosporioides	62.14	7.00e-114	401.00
IUUC-Cne-026868	Cryptococcus neoformans	33.94	4.00e-42	162.00
IUUC-Cme-027328	Cyanidioschyzon merolae	24.44	2.00e-13	67.80
IUUC-Dre-028085	Danio rerio	35.77	4.00e-46	176.00
IUUC-Dno-030099	Dasypus novemcinctus	34.80	8.00e-43	166.00
IUUC-Dor-030324	Dipodomys ordii	31.14	3.00e-32	130.00
IUUC-Dse-031314	Dothistroma septosporum	80.06	3.00e-154	535.00
IUUC-Dme-031926	Drosophila melanogaster	31.29	1.00e-38	151.00
IUUC-Ete-032569	Echinops telfairi	32.64	7.00e-38	149.00
IUUC-Eca-033502	Equus caballus	32.99	3.00e-40	157.00
IUUC-Eeu-034883	Erinaceus europaeus	26.84	7.00e-13	65.10
IUUC-Fca-035873	Felis catus	34.80	6.00e-43	166.00
IUUC-Fal-036921	Ficedula albicollis	35.29	8.00e-46	175.00
IUUC-Fox-037765	Fusarium oxysporum	62.01	9.00e-111	391.00
IUUC-Fso-038240	Fusarium solani	62.01	9.00e-112	394.00
IUUC-Gmo-038864	Gadus morhua	35.53	3.00e-45	173.00
IUUC-Ggr-039862	Gaeumannomyces graminis	58.96	1.00e-100	358.00
IUUC-Gga-040952	Gallus gallus	35.29	1.00e-45	174.00
IUUC-Gac-041677	Gasterosteus aculeatus	33.22	2.00e-45	174.00
IUUC-Gma-043061	Glycine max	34.89	2.00e-36	144.00
IUUC-Ggo-045591	Gorilla gorilla	34.80	4.00e-43	167.00
IUUC-Hsa-046860	Homo sapiens	34.80	4.00e-43	166.00
IUUC-Hvu-047410	Hordeum vulgare	28.57	2.00e-16	76.60
IUUC-Itr-048211	Ictidomys tridecemlineatus	34.80	7.00e-43	166.00
IUUC-Lch-049410	Latimeria chalumnae	33.02	7.00e-25	105.00
IUUC-Lpe-051102	Leersia perrieri	33.96	4.00e-37	146.00
IUUC-Loc-052016	Lepisosteus oculatus	31.25	3.00e-32	130.00
IUUC-Laf-054568	Loxodonta africana	34.80	9.00e-43	165.00
IUUC-Mcc-054613	Macaca mulatta	34.80	4.00e-43	167.00
IUUC-Meu-056832	Macropus eugenii	30.00	5.00e-15	72.40
IUUC-Mor-057104	Magnaporthe oryzae	58.77	7.00e-106	375.00
IUUC-Mtr-058445	Medicago truncatula	35.87	2.00e-45	174.00
IUUC-Mla-059038	Melampsora laricipopulina	41.03	4.00e-55	206.00
IUUC-Mga-059548	Meleagris gallopavo	33.76	9.00e-40	154.00
IUUC-Mvi-060520	Microbotryum violaceum	34.33	1.00e-38	151.00
IUUC-Mdo-062376	Monodelphis domestica	34.67	9.00e-44	168.00
IUUC-Mmu-063254	Mus musculus	34.80	7.00e-43	166.00
IUUC-Mac-065635	Musa acuminata	34.71	2.00e-38	150.00
IUUC-Mpu-066314	Mustela putorius furo	34.80	5.00e-43	166.00
IUUC-Mlu-067512	Myotis lucifugus	34.43	4.00e-43	166.00
IUUC-Nfi-068262	Neosartorya fischeri	79.48	8.00e-148	514.00
IUUC-Ncr-068872	Neurospora crassa	59.15	3.00e-99	353.00
IUUC-Nle-070118	Nomascus leucogenys	34.80	7.00e-43	166.00
IUUC-Opr-071228	Ochotona princeps	32.79	6.00e-38	149.00
IUUC-Ont-072600	Oreochromis niloticus	35.90	8.00e-47	178.00
IUUC-Oan-073584	Ornithorhynchus anatinus	34.18	6.00e-39	152.00
IUUC-Ocu-074542	Oryctolagus cuniculus	34.80	3.00e-43	167.00
IUUC-Oba-075923	Oryza barthii	34.03	5.00e-40	155.00
IUUC-Obr-076313	Oryza brachyantha	34.46	3.00e-39	153.00
IUUC-Ogl-076932	Oryza glaberrima	34.03	5.00e-40	155.00
IUUC-Ogu-078152	Oryza glumaepatula	34.03	5.00e-40	155.00
IUUC-Oin-079528	Oryza indica	34.03	5.00e-40	155.00
IUUC-Olo-080401	Oryza longistaminata	34.03	5.00e-40	155.00
IUUC-Ome-081553	Oryza meridionalis	34.03	3.00e-40	156.00
IUUC-Oni-082090	Oryza nivara	34.03	2.00e-40	157.00
IUUC-Opu-083583	Oryza punctata	34.33	2.00e-37	147.00
IUUC-Oru-084492	Oryza rufipogon	34.03	5.00e-40	155.00
IUUC-Osa-085383	Oryza sativa	34.03	5.00e-40	155.00
IUUC-Ola-086835	Oryzias latipes	36.26	6.00e-47	179.00
IUUC-Olu-087716	Ostreococcus lucimarinus	28.99	8.00e-23	99.00
IUUC-Oga-088886	Otolemur garnettii	34.80	2.00e-43	168.00
IUUC-Oar-090079	Ovis aries	34.72	1.00e-43	168.00
IUUC-Ptr-091457	Pan troglodytes	34.80	4.00e-43	166.00
IUUC-Pan-092317	Papio anubis	31.05	2.00e-21	93.60
IUUC-Psi-093129	Pelodiscus sinensis	33.58	3.00e-40	157.00
IUUC-Pma-094488	Petromyzon marinus	34.34	2.00e-49	187.00
IUUC-Pno-095049	Phaeosphaeria nodorum	96.49	0.00e+00	624.00
IUUC-Ppa-095341	Physcomitrella patens	36.63	1.00e-49	187.00
IUUC-Pfo-096286	Poecilia formosa	35.53	3.00e-45	173.00
IUUC-Pab-097765	Pongo abelii	34.80	4.00e-43	166.00
IUUC-Pop-099131	Populus trichocarpa	35.46	5.00e-42	162.00
IUUC-Pca-100524	Procavia capensis	26.89	2.00e-20	90.90
IUUC-Ppe-101934	Prunus persica	37.23	3.00e-47	180.00
IUUC-Pva-102577	Pteropus vampyrus	34.43	9.00e-43	165.00
IUUC-Pgr-103521	Puccinia graminis	35.26	8.00e-49	185.00
IUUC-Pte-104304	Pyrenophora teres	94.89	5.00e-179	618.00
IUUC-Pyt-104563	Pyrenophora triticirepentis	94.89	8.00e-179	617.00
IUUC-Rno-105717	Rattus norvegicus	34.80	4.00e-43	166.00
IUUC-Sha-107190	Sarcophilus harrisii	35.09	3.00e-43	167.00
IUUC-Sja-107918	Schizosaccharomyces japonicus	52.13	1.00e-90	324.00
IUUC-Spo-108355	Schizosaccharomyces pombe	53.47	4.00e-91	325.00
IUUC-Smo-109374	Selaginella moellendorffii	38.32	3.00e-50	189.00
IUUC-Sit-110119	Setaria italica	33.58	2.00e-38	150.00
IUUC-Sly-111570	Solanum lycopersicum	30.40	2.00e-32	130.00
IUUC-Stu-112308	Solanum tuberosum	32.41	9.00e-39	151.00
IUUC-Sar-113515	Sorex araneus	31.03	2.00e-05	40.40
IUUC-Sbi-114605	Sorghum bicolor	33.21	5.00e-39	153.00
IUUC-Sre-114906	Sporisorium reilianum	46.74	8.00e-64	235.00
IUUC-Tgu-117087	Taeniopygia guttata	34.17	4.00e-39	152.00
IUUC-Tru-117700	Takifugu rubripes	34.25	2.00e-46	177.00
IUUC-Tni-120470	Tetraodon nigroviridis	35.53	5.00e-47	179.00
IUUC-Tca-121109	Theobroma cacao	35.69	1.00e-37	148.00
IUUC-Tre-122095	Trichoderma reesei	62.01	2.00e-110	390.00
IUUC-Tvi-122580	Trichoderma virens	62.01	3.00e-110	389.00
IUUC-Tae-125129	Triticum aestivum	34.71	6.00e-41	159.00
IUUC-Tur-126658	Triticum urartu	30.49	1.00e-33	135.00
IUUC-Tme-127043	Tuber melanosporum	68.30	2.00e-125	439.00
IUUC-Tbe-127927	Tupaia belangeri	34.80	6.00e-43	166.00
IUUC-Ttr-129231	Tursiops truncatus	34.80	4.00e-43	166.00
IUUC-Uma-129578	Ustilago maydis	47.08	2.00e-64	237.00
IUUC-Vda-129730	Verticillium dahliae	60.58	6.00e-115	405.00
IUUC-Vvi-130968	Vitis vinifera	34.63	3.00e-42	163.00
IUUC-Xtr-132203	Xenopus tropicalis	36.40	3.00e-46	176.00
IUUC-Xma-133972	Xiphophorus maculatus	35.53	8.00e-45	171.00
IUUC-Yli-134553	Yarrowia lipolytica	46.98	1.00e-71	261.00
IUUC-Zma-134941	Zea mays	32.85	7.00e-34	135.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence