iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080445

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN538781.1_FG056	KN538781.1_FGT056	KN538781.1_FGP056

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-09	38.7	93	122

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWD 29
           H + v+c++f   + + +v+++ D++++ WD
   Q: 93   HHEVVSCIEFsqiT-GQVVTATLDKKLMFWD 122
           7788******7654.89************** PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MGWRRREGGG AVAGAASRLR FAPSSNHLLV SSWDSGLRLY DADASELRME AKSEAALLDC 60
CFQDEAVALT GGSDGSIIRY DLHSGAQGTI GQHHEVVSCI EFSQITGQVV TATLDKKLMF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGATGGC GGCGGCGGGA GGGCGGCGGC GCCGTCGCCG GCGCGGCCTC GAGGCTTCGG 60
TTCGCGCCGT CCTCCAACCA CCTGCTCGTC TCCTCGTGGG ATTCGGTGAG ATCCCTTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001094	Aegilops tauschii	56.35	7.00e-94	335.00
IUUC-Aly-006482	Arabidopsis lyrata	38.08	6.00e-51	193.00
IUUC-Ath-007619	Arabidopsis thaliana	38.08	9.00e-51	192.00
IUUC-Bdi-014018	Brachypodium distachyon	58.54	6.00e-100	356.00
IUUC-Bol-016156	Brassica oleracea	36.65	7.00e-56	209.00
IUUC-Bra-017094	Brassica rapa	36.88	2.00e-56	211.00
IUUC-Gma-043264	Glycine max	40.44	3.00e-61	228.00
IUUC-Lpe-051057	Leersia perrieri	68.29	2.00e-115	407.00
IUUC-Mtr-058179	Medicago truncatula	38.96	1.00e-57	215.00
IUUC-Mac-064581	Musa acuminata	42.76	2.00e-69	254.00
IUUC-Oba-075790	Oryza barthii	80.84	3.00e-141	493.00
IUUC-Obr-076040	Oryza brachyantha	68.90	5.00e-120	422.00
IUUC-Ogu-079013	Oryza glumaepatula	89.67	6.00e-110	389.00
IUUC-Oin-080034	Oryza indica	82.30	0.00e+00	830.00
IUUC-Ome-081933	Oryza meridionalis	90.14	2.00e-110	391.00
IUUC-Oni-082305	Oryza nivara	81.17	1.00e-141	494.00
IUUC-Opu-083254	Oryza punctata	72.41	9.00e-126	442.00
IUUC-Oru-085161	Oryza rufipogon	81.17	1.00e-141	494.00
IUUC-Pop-099762	Populus trichocarpa	43.32	7.00e-64	236.00
IUUC-Ppe-101222	Prunus persica	45.63	2.00e-31	128.00
IUUC-Sit-110260	Setaria italica	52.98	2.00e-87	314.00
IUUC-Sly-111593	Solanum lycopersicum	36.56	1.00e-45	175.00
IUUC-Stu-112000	Solanum tuberosum	37.17	6.00e-53	200.00
IUUC-Sbi-114097	Sorghum bicolor	57.41	2.00e-96	345.00
IUUC-Tca-121403	Theobroma cacao	42.68	2.00e-66	245.00
IUUC-Tae-122702	Triticum aestivum	57.67	3.00e-96	343.00
IUUC-Tur-126104	Triticum urartu	57.24	1.00e-97	348.00
IUUC-Vvi-131179	Vitis vinifera	37.66	4.00e-56	210.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence