iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099762

Ensembl Protein ID

POPTR_0008s09160.1

UniProt Accession

B9HIB7; B9HIB7_POPTR

Genbank Protein ID

EEE89636.2

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000344

Gene Name

POPTR_0008s09160g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0008s09160	POPTR_0008s09160.1	POPTR_0008s09160.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.30e-08	34.0	14	44

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           d v+ ++f   s + l+ +s+D +++++D+++
   Q: 14   DAVSRIRFapqS-NNLLISSWDSNLRLYDVDS 44
           7789999**754.4445558*********976 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MKGACLNFEN PIEDAVSRIR FAPQSNNLLI SSWDSNLRLY DVDSSLLRLE APAPSQAALL 60
DCCFQSESVA FTAASDGSIT RYDLHSGTID AIGNHQDMAT CVGYSIETCQ VISAGLDKKV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATGGTAGTT CGTAGGTAAC ATAGATTCAA ATAATTATCC CGCTGTCTAC GCTGAGCGGG 60
AGGGAACCTT TTCTTCTTGT TCACTTTCCC TGCGTCTTAT AGCTTCTTTA TTAGGGCAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

KEGG

pop:POPTR_0008s09160g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001094	Aegilops tauschii	48.46	1.00e-70	259.00
IUUC-Atr-002604	Amborella trichopoda	47.71	2.00e-80	291.00
IUUC-Aly-006482	Arabidopsis lyrata	54.75	2.00e-91	328.00
IUUC-Ath-007619	Arabidopsis thaliana	53.62	4.00e-90	323.00
IUUC-Bdi-014018	Brachypodium distachyon	48.28	7.00e-74	270.00
IUUC-Bol-016156	Brassica oleracea	55.92	1.00e-97	348.00
IUUC-Bra-017094	Brassica rapa	54.28	8.00e-96	343.00
IUUC-Gma-043687	Glycine max	61.76	5.00e-113	400.00
IUUC-Lpe-051057	Leersia perrieri	47.46	4.00e-73	267.00
IUUC-Mtr-058179	Medicago truncatula	60.96	3.00e-107	380.00
IUUC-Mac-064581	Musa acuminata	55.74	1.00e-88	318.00
IUUC-Oba-075790	Oryza barthii	49.30	7.00e-77	280.00
IUUC-Obr-076040	Oryza brachyantha	50.00	5.00e-77	280.00
IUUC-Ogu-079013	Oryza glumaepatula	44.14	1.00e-72	265.00
IUUC-Oin-080034	Oryza indica	49.30	7.00e-77	280.00
IUUC-Olo-080445	Oryza longistaminata	42.90	1.00e-61	229.00
IUUC-Ome-081933	Oryza meridionalis	44.14	6.00e-73	266.00
IUUC-Oni-082305	Oryza nivara	49.30	4.00e-77	280.00
IUUC-Opu-083254	Oryza punctata	43.43	1.00e-63	235.00
IUUC-Oru-085161	Oryza rufipogon	49.30	4.00e-77	280.00
IUUC-Ppe-101222	Prunus persica	64.20	7.00e-76	276.00
IUUC-Sit-110260	Setaria italica	45.14	7.00e-68	249.00
IUUC-Sly-111593	Solanum lycopersicum	50.33	5.00e-78	283.00
IUUC-Stu-112000	Solanum tuberosum	57.24	3.00e-100	357.00
IUUC-Sbi-114097	Sorghum bicolor	47.60	1.00e-72	265.00
IUUC-Tca-121403	Theobroma cacao	70.07	5.00e-126	443.00
IUUC-Tur-126104	Triticum urartu	49.66	1.00e-75	275.00
IUUC-Vvi-131179	Vitis vinifera	62.01	6.00e-113	399.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence