iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111255

Ensembl Protein ID

Solyc02g089870.1.1

UniProt Accession

K4BCD8; K4BCD8_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc02g089870.1	Solyc02g089870.1.1	Solyc02g089870.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.50e-06	28.2	25	80
E3 activity/RING/RING	4.00e-06	28.0	28	69

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggk..tcPvtrqplteedlvPn 58
           +f C I +el +dP v+ +G+ +   ++ +wl+   +  +cPv+++ ++ee+lvP 
   Q: 25   DFECNICFELAQDPIVTLCGHLFCWPCLYRWLRLHSQchECPVCKALIQEEKLVPL 80
           699*****************************54444458**************96 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC+e  +d p+v+ CgH+f+  Cl++w    ++ s+   CP+C+
   Q: 28   CNICFELAQD-PIVTLCGHLFCWPCLYRW---LRLHSQCHECPVCK 69
           99********.999***************...77799999*****6 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MQDSTTRAFE SSSSSSGDGN NDAGDFECNI CFELAQDPIV TLCGHLFCWP CLYRWLRLHS 60
QCHECPVCKA LIQEEKLVPL YGRGRTSTDP RSKPIPGLEI PSRPAGQRPE TAPQPEPNHF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAGGACT CAACTACCAG GGCATTTGAA AGCTCTTCTT CTTCCTCTGG AGATGGGAAC 60
AATGATGCTG GTGATTTTGA ATGCAACATA TGTTTTGAAT TGGCCCAAGA TCCCATTGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:0016021--C:integral component of membrane
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

sly:101263175

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001155	Aegilops tauschii	51.16	1.00e-52	199.00
IUUC-Atr-002444	Amborella trichopoda	57.77	7.00e-57	213.00
IUUC-Aly-006065	Arabidopsis lyrata	58.73	1.00e-55	208.00
IUUC-Ath-007267	Arabidopsis thaliana	57.67	8.00e-55	206.00
IUUC-Ame-011316	Astyanax mexicanus	53.33	8.00e-26	108.00
IUUC-Bdi-014183	Brachypodium distachyon	65.54	6.00e-51	192.00
IUUC-Bol-016132	Brassica oleracea	59.31	3.00e-62	230.00
IUUC-Bra-017631	Brassica rapa	58.74	3.00e-61	227.00
IUUC-Cme-027164	Cyanidioschyzon merolae	55.71	1.00e-21	96.30
IUUC-Dme-031966	Drosophila melanogaster	41.72	3.00e-25	107.00
IUUC-Eeu-034614	Erinaceus europaeus	47.83	3.00e-14	70.90
IUUC-Fal-037085	Ficedula albicollis	55.41	1.00e-21	95.10
IUUC-Gac-041719	Gasterosteus aculeatus	55.71	7.00e-22	95.90
IUUC-Gma-043248	Glycine max	62.25	4.00e-70	256.00
IUUC-Hvu-047043	Hordeum vulgare	53.37	1.00e-49	188.00
IUUC-Lpe-050836	Leersia perrieri	66.67	9.00e-57	214.00
IUUC-Loc-052118	Lepisosteus oculatus	55.07	3.00e-21	94.00
IUUC-Mac-065390	Musa acuminata	63.10	3.00e-59	220.00
IUUC-Mpu-066033	Mustela putorius furo	57.97	9.00e-22	98.60
IUUC-Ont-072482	Oreochromis niloticus	51.43	2.00e-25	107.00
IUUC-Oba-075461	Oryza barthii	51.36	5.00e-51	193.00
IUUC-Ogl-076945	Oryza glaberrima	56.40	3.00e-57	214.00
IUUC-Ogu-078463	Oryza glumaepatula	63.51	6.00e-49	186.00
IUUC-Oin-079606	Oryza indica	55.45	5.00e-56	210.00
IUUC-Olo-080378	Oryza longistaminata	56.40	3.00e-57	214.00
IUUC-Ome-081459	Oryza meridionalis	56.40	1.00e-56	212.00
IUUC-Oni-082738	Oryza nivara	56.40	2.00e-57	215.00
IUUC-Opu-083407	Oryza punctata	56.19	2.00e-57	214.00
IUUC-Oru-084757	Oryza rufipogon	63.51	4.00e-49	186.00
IUUC-Osa-086126	Oryza sativa	56.40	3.00e-57	214.00
IUUC-Ola-086507	Oryzias latipes	48.25	1.00e-26	112.00
IUUC-Oga-088197	Otolemur garnettii	52.56	7.00e-22	96.30
IUUC-Ppa-095474	Physcomitrella patens	63.70	4.00e-52	197.00
IUUC-Pfo-096818	Poecilia formosa	36.41	2.00e-26	110.00
IUUC-Pop-099017	Populus trichocarpa	59.55	8.00e-62	229.00
IUUC-Ppe-102011	Prunus persica	61.76	9.00e-71	258.00
IUUC-Pva-102249	Pteropus vampyrus	50.81	2.00e-26	110.00
IUUC-Sce-106439	Saccharomyces cerevisiae	37.74	2.00e-08	52.00
IUUC-Smo-109663	Selaginella moellendorffii	53.17	2.00e-35	140.00
IUUC-Sit-109934	Setaria italica	55.50	4.00e-55	207.00
IUUC-Stu-112117	Solanum tuberosum	97.57	3.00e-95	339.00
IUUC-Sbi-114116	Sorghum bicolor	69.59	3.00e-55	207.00
IUUC-Tgu-116886	Taeniopygia guttata	55.41	1.00e-21	95.10
IUUC-Tca-121830	Theobroma cacao	68.81	7.00e-74	269.00
IUUC-Tae-124257	Triticum aestivum	65.10	9.00e-50	189.00
IUUC-Tur-126443	Triticum urartu	65.10	8.00e-50	189.00
IUUC-Tbe-127360	Tupaia belangeri	57.97	2.00e-21	94.00
IUUC-Vpa-130365	Vicugna pacos	56.52	2.00e-20	91.30
IUUC-Vvi-131725	Vitis vinifera	59.90	1.00e-67	248.00
IUUC-Xtr-131916	Xenopus tropicalis	53.85	6.00e-23	99.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence