iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005493

UUCD1 version

UUC-ArL-00680

Ensembl Protein ID

fgenesh2_kg.8__30__AT5G47610.1

UniProt Accession

D7MP29; D7MP29_ARALL

Genbank Protein ID

EFH39589.1

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348720

Gene Name

ARALYDRAFT_494214

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.8__30__AT5G47610.1	fgenesh2_kg.8__30__AT5G47610.1	fgenesh2_kg.8__30__AT5G47610.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.00e-09	37.2	107	149

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg...plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl++f++g    ++  C+H fh +C++kw       s++ +CP+Cr
   Q: 107  CAICLSEFEQGesiQVLEKCQHGFHVKCIHKW------LSTRSSCPTCR 149
           ********77666544488*************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MRFLVEEVAS PLSSAATPTC NSHTCRWKPY SNSTDFTANA SVLLILVISA LICALSLYAA 60
IRCFLRPTLE TEDDHKPDLE AAAPSTATTP TLVYSSDLEL AGAEAECAIC LSEFEQGESI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGATGCGTT TTCTAGTAGA AGAAGTAGCT TCACCATTGT CCTCTGCTGC AACTCCAACA 60
TGTAACTCTC ATACTTGCAG ATGGAAGCCT TACTCAAACT CTACTGACTT CACAGCTAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_494214

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007428	Arabidopsis thaliana	95.18	1.00e-57	214.00
IUUC-Bol-015810	Brassica oleracea	81.69	6.00e-46	176.00
IUUC-Bra-018017	Brassica rapa	81.69	5.00e-46	176.00
IUUC-Ogu-078237	Oryza glumaepatula	41.48	2.00e-13	67.80
IUUC-Oin-079416	Oryza indica	41.48	2.00e-13	67.80
IUUC-Ome-081260	Oryza meridionalis	41.48	2.00e-13	67.80
IUUC-Opu-084022	Oryza punctata	42.75	1.00e-15	75.10
IUUC-Osa-086043	Oryza sativa	41.48	2.00e-13	67.80
IUUC-Pop-098935	Populus trichocarpa	52.26	3.00e-32	130.00
IUUC-Ppe-101902	Prunus persica	50.00	5.00e-30	123.00
IUUC-Tca-121529	Theobroma cacao	57.24	2.00e-42	164.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence