iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043742

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000839

Gene Name

LOC100810607; GLYMA_06G274300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA06G42690	GLYMA06G42690.1	GLYMA06G42690.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-11	46.6	171	212

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCledf  +++++++pC+H+fh+dC+  w         + +CP+Cr
   Q: 171  CAICLEDFdpSEEVMLTPCNHMFHEDCIVPW------LTSKGQCPVCR 212
           ********88556******************......888889****8 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MSRNINNFTP LPGSWQRGFR SFDDHTFNHR ESNEVPVFYG SHSTHATDGR SSGVLARQRF 60
SDFRNPLGFH SIPNFPAPPP RRQQIHAHNE DMGRLREIFL HPPQRSTFQT STQALPVVEI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAATATTTG CACCCCGAAA AAGAAAAGTA TTTTACATCA TCAATTGAAG AGGAAGGTGA 60
AATCACCATG AGCCGCAACA TCAACAATTT CACACCTTTG CCAGGGTCAT GGCAAAGAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005601	Arabidopsis lyrata	47.48	1.00e-26	112.00
IUUC-Ath-007601	Arabidopsis thaliana	45.74	6.00e-25	107.00
IUUC-Bra-017303	Brassica rapa	49.30	1.00e-33	136.00
IUUC-Mtr-057929	Medicago truncatula	59.78	8.00e-78	283.00
IUUC-Ogl-077650	Oryza glaberrima	41.51	2.00e-21	95.50
IUUC-Oin-079751	Oryza indica	42.45	7.00e-22	97.10
IUUC-Oni-082573	Oryza nivara	42.45	7.00e-22	97.10
IUUC-Opu-083625	Oryza punctata	38.46	3.00e-22	98.20
IUUC-Oru-084894	Oryza rufipogon	42.45	7.00e-22	97.10
IUUC-Osa-086183	Oryza sativa	42.45	7.00e-22	97.10
IUUC-Pop-098997	Populus trichocarpa	44.50	9.00e-43	166.00
IUUC-Ppe-102043	Prunus persica	41.85	1.00e-30	126.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence