iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006546

Ensembl Protein ID

fgenesh2_kg.5__789__AT3G43430.1

UniProt Accession

D7LM92; D7LM92_ARALL

Genbank Protein ID

EFH53533.1

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348717

Gene Name

ARALYDRAFT_484797

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.5__789__AT3G43430.1	fgenesh2_kg.5__789__AT3G43430.1	fgenesh2_kg.5__789__AT3G43430.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.70e-10	39.7	83	134

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkw.....pglknssskefrCPlCr 46
           Ca+Cl d+  +d+ + l+ C+Hvfh+dC+ +w      g    + ++ +CPlCr
   Q: 83   CAVCLGDLedDDEIRELRnCNHVFHRDCIDRWleyecRGGD--EDNHRTCPLCR 134
           ********77555777777*************998655555..99999*****8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MTFFIEDTSV IISHVLYKTA VIIAVLRWIF AWSLRYRSRS SSSSSSQSSS TPLISSQTIK 60
ESLAVTAFRD AVERSPATIN DTCAVCLGDL EDDDEIRELR NCNHVFHRDC IDRWLEYECR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCAAGTTT TCACAATGAC TTTCTTCATC GAAGACACTA GTGTCATCAT CAGCCACGTT 60
CTCTACAAAA CGGCGGTTAT CATCGCCGTT TTACGATGGA TTTTCGCCTG GAGCCTCCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_484797

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007481	Arabidopsis thaliana	89.22	6.00e-63	232.00
IUUC-Afl-008676	Aspergillus flavus	50.00	3.00e-12	66.60
IUUC-Gma-043552	Glycine max	45.98	3.00e-33	133.00
IUUC-Mtr-058513	Medicago truncatula	45.00	4.00e-33	133.00
IUUC-Pop-098796	Populus trichocarpa	52.94	2.00e-32	131.00
IUUC-Ppe-101734	Prunus persica	43.81	6.00e-31	126.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence